Return to main results Retrieve Phyre Job Id

Job DescriptionP76134
Confidence96.89%DateThu Jan 5 12:19:23 GMT 2012
Rank16Aligned Residues145
% Identity11%Templatec3ewbX_
PDB info PDB header:transferaseChain: X: PDB Molecule:2-isopropylmalate synthase; PDBTitle: crystal structure of n-terminal domain of putative 2-2 isopropylmalate synthase from listeria monocytogenes
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40.........50.........60.........70.........80.........90.........100.........110...
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  MDDSTLKEFIKQYIAASGNQVYFTWQGGEPTLAGLDFFRKVIHYQQRYAGQKRIFNALQTNGILLNNEWCAFLKEHEFLV
Query Conservation 
  
     
            
   





        
                  


 
        
       
Alig confidence 






















....









..

























.













Template Conservation       
  
   
   

  


....
         ..                          .              
Template Sequence  FDVKEKIQIALQLEKLGIDVIEA. . . . GFPISSPGDF. . ECVKAIAKAIKHCSVTGLARCVEGDI. DRAEEALKDAVSPQ
Template Known Secondary structure 

T
S....
GGG
..

SSSS.TT
SS
Template Predicted Secondary structure 





....






..







.



Template SS confidence 















































































   22.......30.........40.... .....50.... .....60.........70.........80 .........90....
 
   114.....120.........130.........140.........150......... 160.........170.........180.....
Predicted Secondary structure 












.








Query SS confidence 













































.

























Query Sequence  GISIDGPQELHDRYRRSNSGNGTFAKVIAAIERLKSYQVEFNTLTV. INNVNVHYPLEVYHFLKSIGSKHMQF
Query Conservation    
 

     
  
    
 
 
  
   
  
   
    
   .    
              
   
  
Alig confidence 













































.

























Template Conservation 
      
                             
  
                         
 
 
 
Template Sequence  IHIFLATSDVHXEYKLKXSRAEVLASIKHHISYARQKFDVVQFSPEDATRSDRAFLIEAVQTAIDAGATVINI
Template Known Secondary structure 
STT


TT
S
TGGGS
TT

Template Predicted Secondary structure 



















Template SS confidence 








































































   95....100.........110.........120.........130.........140.........150.........160.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions