Job Description P76134 Confidence 69.09% Date Thu Jan 5 12:19:23 GMT 2012 Rank 27 Aligned Residues 143 % Identity 11% Template c2zyfA_ PDB info PDB header:transferase Chain: A: PDB Molecule:homocitrate synthase; PDBTitle: crystal structure of homocitrate synthase from thermus thermophilus2 complexed with magnesuim ion and alpha-ketoglutarate Resolution 2.15 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	S	Q	F	T	H	E	K	W	M	D	D	S	T	L	K	E	F	I	K	Q	Y	I	A	A	S	G	N	Q	V	Y	F	T	W	Q	G	G	E	P	T	L	A	G	L	D	F	F	R	K	V	I	H	Y	Q	Q	R	Y	A	G	Q	K	R	I	F	N	A	L	Q	T	N	G	I	L	L	N	N	E	W	C
Query Conservation
Alig confidence																																			.	.	.	.									.	.																									.	.	.	.	.
Template Conservation																																			.	.	.	.									.	.																									.	.	.	.	.
Template Sequence		R	E	G	E	Q	F	E	K	A	N	F	S	T	Q	D	K	V	E	I	A	K	A	L	D	E	F	G	I	E	Y	I	E	V	.	.	.	.	T	T	P	V	A	S	P	Q	.	.	S	R	K	D	A	E	V	L	A	S	L	G	L	K	A	K	V	V	T	H	I	Q	C	R	.	.	.	.	.	L	D	A	A
Template Known Secondary structure		T	G	G	G	G	S	T	T																			T		S					.	.	.	.			G	G	G				.	.											S			S	S								S		.	.	.	.	.
Template Predicted Secondary structure																																			.	.	.	.									.	.																									.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.					.	.	.	.	.	50	.	.			.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.						.	.	.	80
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160				.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																																																											.	.	.
Query SS confidence																																																											.	.	.
Query Sequence		A	F	L	K	E	H	E	F	L	V	G	I	S	I	D	G	P	Q	E	L	H	D	R	Y	R	R	S	N	S	G	N	G	T	F	A	K	V	I	A	A	I	E	R	L	K	S	Y	Q	V	E	F	N	T	L	T	V	I	.	.	.	N	N	V	N	V	H	Y	P	L	E	V	Y	H	F	L	K	S	I	G	S
Query Conservation																																																											.	.	.
Alig confidence																											.	.	.	.	.	.	.																										.	.	.														.
Template Conservation																											.	.	.	.	.	.	.																																										.
Template Sequence		K	V	A	V	E	T	G	V	Q	G	I	D	L	L	F	G	T	S	K	G	R	D	I	P	R	.	.	.	.	.	.	.	I	I	E	E	A	K	E	V	I	A	Y	I	R	E	A	A	P	H	V	E	V	R	F	S	A	E	D	T	F	R	S	E	E	Q	D	L	L	A	V	Y	E	.	A	V	A	P	Y	V
Template Known Secondary structure							T	T		S								S									.	.	.	.	.	.	.																	T	T	S							S	S	T	T	T	S											.			G	G	G
Template Predicted Secondary structure																											.	.	.	.	.	.	.																																										.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.								.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.
		181	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	H	M	Q	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	R	V	G	L
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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