Job Description P76134 Confidence 99.87% Date Thu Jan 5 12:19:23 GMT 2012 Rank 2 Aligned Residues 180 % Identity 13% Template c2yx0A_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:radical sam enzyme; PDBTitle: crystal structure of p. horikoshii tyw1 Resolution 2.21 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.																						.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	T	A	K	P	S	S	F	Q	C	N	L	K	C	D	Y	C	F	Y	L	E	K	E	S	Q	F	T	H	E	K	W	M	D	D	S	T	L	K	E	F	I	K	Q	Y	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	G	N	Q	V	Y	F	T	W	Q	G	G
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation																							.																																																							.
Template Sequence		L	Q	M	T	P	V	L	A	W	C	T	H	N	C	I	F	C	W	R	P	M	.	E	N	F	L	G	T	E	L	P	Q	P	W	D	D	P	A	F	I	V	E	E	S	I	K	A	Q	R	K	L	L	I	G	Y	K	P	K	V	D	K	K	K	F	E	E	A	W	N	P	T	H	A	A	I	S	.	L	S	G
Template Known Secondary structure						S		S	S			S	B			T	T				S	S	.	S	S		S		S	S			S	S																				T	T					S									T	S								.	S	S	S
Template Predicted Secondary structure																							.																																																							.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		E	P	T	L	A	G	L	D	F	F	R	K	V	I	H	Y	Q	Q	R	Y	A	G	Q	K	R	I	F	N	A	L	Q	T	N	G	I	L	L	N	N	E	W	C	A	F	L	K	E	H	E	F	L	.	V	G	I	S	I	D	G	P	Q	E	L	H	D	R	Y	R	R	S	N	S	G	N	G	T	F	A	K	V
Query Conservation																																																					.
Alig confidence									.	.											.	.	.	.																													.
Template Conservation									.	.											.	.	.	.
Template Sequence		E	P	M	L	Y	P	Y	.	.	M	G	D	L	V	E	E	F	H	K	.	.	.	.	R	G	F	T	T	F	I	V	T	N	G	T	I	P	E	R	L	E	E	M	I	K	E	D	K	L	P	T	Q	L	Y	V	S	I	T	A	P	D	I	E	T	Y	N	S	V	N	I	P	M	I	P	D	G	W	E	R	I
Template Known Secondary structure			G	G	G	S	T	T	.	.											.	.	.	.	T	T									S												T	T				S									S	S										B	S	S	S
Template Predicted Secondary structure									.	.											.	.	.	.
Template SS confidence
		152	.	.	.	.	.	.			.	160	.	.	.	.	.	.	.	.					.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		I	A	A	I	E	R	L	K	S	Y	Q	V	E	F	N	T	L	T	V	I	N	N	V	.	N	V	H	Y	P	L	E	V	Y	H	F	L	K	S	I	G	S	K	H	M	Q	F	I	E	L	L	E
Query Conservation																									.
Alig confidence																									.
Template Conservation
Template Sequence		L	R	F	L	E	L	M	R	D	L	P	T	R	T	V	V	R	L	T	L	V	K	G	E	N	M	H	S	P	E	K	Y	A	K	L	I	L	K	A	R	P	M	F	V	E	A	K	A	Y	M	N
Template Known Secondary structure									T	T		S	S										T	T	T	T																	S
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions