Job Description P76134 Confidence 59.58% Date Thu Jan 5 12:19:23 GMT 2012 Rank 29 Aligned Residues 139 % Identity 9% Template c2vefB_ PDB info PDB header:transferase Chain: B: PDB Molecule:dihydropteroate synthase; PDBTitle: dihydropteroate synthase from streptococcus pneumoniae Resolution 1.8 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	D	S	T	L	K	E	F	I	K	Q	Y	I	A	A	S	G	N	Q	V	Y	F	T	W	Q	G	G	E	P	T	L	A	G	L	D	F	F	R	K	V	I	H	Y	Q	Q	R	Y	A	G	Q	K	R	I	F	N	A	L	Q	T	N	G	I	L	L	N	N	E	W	C	A	F	L	K	E	H	E	F	L	V
Query Conservation
Alig confidence																									.	.	.																																			.	.	.	.
Template Conservation																									.	.	.																																			.	.	.	.
Template Sequence		V	T	L	E	Q	A	L	Q	Q	A	R	K	L	I	A	E	G	A	S	M	L	D	I	.	.	.	G	G	E	S	Y	V	E	I	E	E	E	I	Q	R	V	V	P	V	I	K	A	I	R	K	E	S	D	V	L	I	S	I	D	T	.	.	.	.	W	K	S	Q	V	A	E	A	A	L	A	A	G	A	D	L
Template Known Secondary structure																		T		S					.	.	.																																			.	.	.	.	S											T	T
Template Predicted Secondary structure																									.	.	.																																			.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40				.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.					.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.																																160	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	I	S	I	D	G	P	Q	E	L	H	D	R	Y	R	R	S	N	S	G	N	G	T	F	A	K	V	I	A	A	I	E	R	L	K	S	Y	Q	V	E	F	N	T	L	T	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	N	N
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	N	D	I	T	G	L	M	G	D	E	K	M	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	V	V	A	E	A	R	A	Q	V	V	I	M	F	N	P	V	M	A	R	P	Q	H	P	S	S	L	I	F	P	H	F	G	F	T	E	E	E	L	A	D	F	E	T	L	P	I	E	E
Template Known Secondary structure					T	T	T	T		S		T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T														T	T		G	G	G	T	T	S														T	T	S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.																		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	V	H	Y	P	L	E	V	Y	H	F	L	K	S	I	G	S	K	H	M	Q	F	I	E	L	L	E	T	G	T	P	N	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	M	E	A	F	F	E	R	A	L	A	R	A	A	E	A	G	I	A	P	E	N	I	L	L	D	P	G	I	G	F	G	L	T
Template Known Secondary structure																		T			G	G	G							T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions