Job Description P76134 Confidence 18.96% Date Thu Jan 5 12:19:23 GMT 2012 Rank 87 Aligned Residues 114 % Identity 16% Template c1xuzA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:polysialic acid capsule biosynthesis protein siac; PDBTitle: crystal structure analysis of sialic acid synthase (neub)from2 neisseria meningitidis, bound to mn2+, phosphoenolpyruvate, and n-3 acetyl mannosaminitol Resolution 2.20 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.																									.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.
Query Sequence		D	D	S	T	L	K	E	F	I	K	Q	Y	I	A	A	S	G	N	Q	V	Y	F	T	W	Q	G	G	E	P	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	L	D	F	F	R	K	V	I	H	Y	Q	Q	R	.	.	.	.	.	.	.	.	.	.
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	L	K	T	A	F	E	M	V	D	A	A	Y	N	A	G	A	E	V	V	K	H	Q	T	H	I	V	E	D	E	M	S	D	E	A	K	Q	V	I	P	G	N	A	D	V	S	I	Y	E	I	M	E	R	C	A	L	N	E	E	D	E	I	K	L	K	E	Y	V	E	S	K	G	M	I	F	I	S	T	P	F
Template Known Secondary structure																	T		S															G	G	G	G	G				T	T		S	S																										T	T
Template Predicted Secondary structure
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
								81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	Y	A	G	Q	K	R	I	F	N	A	L	Q	T	N	G	I	L	L	N	N	E	W	C	A	F	L	K	E	H	E	F	L	V	G	I	S	I	D	G	P	Q	E	L	H	D	R	Y	R	R	S	N	S	G	N	G	T	F	A	K	V	I	A	A	I	E	R	L	K	S	Y	Q	V	E	F
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	R	A	A	A	L	R	L	Q	R	M	D	I	P	A	Y	K	I	G	S	G	E	C	N	N	Y	P	L	I	K	L	V	A	S	F	G	K	P	I	I	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	M	N	S	I	E	S	I	K	K	S	V	E	I	I	R	E	A	G	V	P	Y
Template Known Secondary structure		S											T		S						G	G	G	T	T										T	T		S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T																	T
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.																.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	T	L	T	V	I	N	N	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	L	H	C	T	N	I	Y
Template Known Secondary structure										S
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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