Job Description P0AFV2 Confidence 26.08% Date Thu Jan 5 11:27:21 GMT 2012 Rank 52 Aligned Residues 70 % Identity 11% Template c2gqqB_ PDB info PDB header:transcription Chain: B: PDB Molecule:leucine-responsive regulatory protein; PDBTitle: crystal structure of e. coli leucine-responsive regulatory protein2 (lrp) Resolution 3.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		N	Y	H	L	Q	L	T	L	V	N	G	N	T	V	S	M	L	D	W	F	K	Q	Q	K	I	K	T	D	L	V	S	L	Q	E	N	E	D	H	E	V	V	A	I	D	I	Q	L	H	A	T	T	S	I	E	D	L	L	.	R	L	L	K	G	M	A	G	V	K	G	V	S
Query Conservation																																																											.
Alig confidence																																																											.
Template Conservation
Template Sequence		L	V	F	V	E	I	T	L	N	R	G	A	P	D	V	F	E	Q	F	N	T	A	V	Q	K	L	E	E	I	Q	E	C	H	L	V	S	G	D	F	D	Y	L	L	K	T	R	V	P	D	M	S	A	Y	R	K	L	L	G	E	T	L	L	R	L	P	G	V	N	D	T	R
Template Known Secondary structure													S	T	T										T	T		S	S						B			S	S		S								S	S								T	T	T	T	G	G	G	S	T	T
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions