Job Description P0AFV2 Confidence 49.71% Date Thu Jan 5 11:27:21 GMT 2012 Rank 31 Aligned Residues 72 % Identity 17% Template c1u8sB_ PDB info PDB header:transcription Chain: B: PDB Molecule:glycine cleavage system transcriptional PDBTitle: crystal structure of putative glycine cleavage system2 transcriptional repressor Resolution 2.45 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		N	Y	H	L	Q	L	T	L	V	N	G	N	T	V	S	M	L	D	W	F	K	Q	Q	K	I	K	T	D	L	V	S	L	Q	E	N	E	.	D	H	E	V	V	A	I	D	I	Q	L	H	A	T	T	S	I	E	D	L	L	R	L	L	K	G	M	A	G	V	K	G	V	S	I	S
Query Conservation																																						.
Alig confidence																																						.
Template Conservation
Template Sequence		E	V	Y	V	E	S	D	D	K	L	G	L	T	E	K	F	T	Q	F	F	A	Q	R	Q	I	G	M	A	S	L	S	A	Q	T	I	S	K	N	Q	F	H	I	A	I	S	A	R	V	D	S	G	C	N	L	M	Q	L	Q	E	E	F	D	A	L	C	T	A	L	D	V	Q	G	S
Template Known Secondary structure								S			T	T	T											T	T																										T	T	S																T	T
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions