Job Description P0A7C2 Confidence 91.81% Date Thu Jan 5 11:05:19 GMT 2012 Rank 235 Aligned Residues 50 % Identity 18% Template c6paxA_ PDB info PDB header:gene regulation/dna Chain: A: PDB Molecule:homeobox protein pax-6; PDBTitle: crystal structure of the human pax-6 paired domain-dna2 complex reveals a general model for pax protein-dna3 interactions Resolution 2.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	L	T	A	R	Q	Q	E	V	F	D	L	I	R	D	H	I	S	Q	T	G	M	P	P	T	R	A	E	I	A	Q	R	L	G	F	R	S	P	N	A	A	E	E	H	L	K	A	L	A	R	K	G	V	I	E	I
Query Conservation
Alig confidence											.	.	.							.					.	.												.
Template Conservation											.	.	.							.					.	.												.
Template Sequence		R	P	L	P	D	S	T	R	Q	.	.	.	R	I	V	E	L	A	.	H	S	G	A	.	.	R	P	C	D	I	S	R	I	L	Q	V	.	S	N	G	C	V	S	K	I	L	G	R	Y	Y	A	T	G	S	I	R	P
Template Known Secondary structure		S									.	.	.							.		T	T		.	.										T		.																S			S
Template Predicted Secondary structure											.	.	.							.					.	.												.
Template SS confidence
		16	.	.	.	20	.	.	.	.				.	.	.	.	.	30		.	.	.	.			.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions