Job Description P0A7C2 Confidence 81.66% Date Thu Jan 5 11:05:19 GMT 2012 Rank 448 Aligned Residues 51 % Identity 20% Template c3iydF_ PDB info PDB header:transcription/dna Chain: F: PDB Molecule:rna polymerase sigma factor rpod; PDBTitle: three-dimensional em structure of an intact activator-dependent2 transcription initiation complex Resolution 19.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	A	L	T	A	R	Q	Q	E	V	F	D	L	I	R	D	H	I	S	Q	T	G	M	P	P	T	R	A	E	I	A	Q	R	L	G	F	R	S	P	N	A	A	E	E	H	L	K	A	L	A	R	K	G
Query Conservation
Alig confidence																										.	.												.
Template Conservation																										.	.												.
Template Sequence		L	A	G	L	T	A	R	E	A	K	V	L	R	M	R	F	G	I	D	M	N	T	D	H	.	.	T	L	E	E	V	G	K	Q	F	D	V	.	T	R	E	R	I	R	Q	I	E	A	K	A	L	R	K	L
Template Known Secondary structure		T	T	S	S													T	S	S	S					.	.	S	T	T	G	G	G	T	T	T	S	S	.		S	S											T	T	T
Template Predicted Secondary structure																										.	.												.
Template SS confidence
		548	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.			.	.	.	.	.	.	.	.	580	.	.		.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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