Job Description P0A7C2 Confidence 91.12% Date Thu Jan 5 11:05:19 GMT 2012 Rank 267 Aligned Residues 46 % Identity 22% Template c3hugA_ PDB info PDB header:transcription/membrane protein Chain: A: PDB Molecule:rna polymerase sigma factor; PDBTitle: crystal structure of mycobacterium tuberculosis anti-sigma factor rsla2 in complex with -35 promoter binding domain of sigl Resolution 2.35 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	A	L	T	A	R	Q	Q	E	V	F	D	L	I	R	D	H	I	S	Q	T	G	M	P	P	T	R	A	E	I	A	Q	R	L	G	F	R	S	P	N	A	A	E	E	H	L	K	A	L	A	R	K
Query Conservation
Alig confidence												.	.	.	.											.	.												.
Template Conservation												.	.	.	.											.	.												.
Template Sequence		L	A	Q	L	S	A	E	H	R	A	.	.	.	.	V	I	Q	R	S	Y	Y	R	G	W	.	.	S	T	A	Q	I	A	T	D	L	G	I	.	A	E	G	T	V	K	S	R	L	H	Y	A	V	R	A
Template Known Secondary structure				T	S							.	.	.	.							T	S			.	.										T	S	.
Template Predicted Secondary structure												.	.	.	.											.	.												.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.					130	.	.	.	.	.	.	.	.	.			140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions