 |
Job Description | P0A7C2 | Confidence | 84.05% | Date | Thu Jan 5 11:05:19 GMT 2012 |
Rank | 427 | Aligned Residues | 50 |
% Identity | 20% | Template | c2pjpA_ |
PDB info |
PDB header:translation/rna | Chain: A: PDB Molecule:selenocysteine-specific elongation factor; |
PDBTitle: structure of the mrna-binding domain of elongation factor2 selb from e.coli in complex with secis rna
|
Resolution | 2.30 Å |
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | T | A | R | Q | Q | E | V | F | D | L | I | R | D | H | I | S | Q | T | G | M | P | P | T | R | A | E | I | A | Q | R | L | G | F | R | S | P | N | A | A | E | E | H | L | K | A | L | A | R | K | G | V | I |
Query Conservation |   |
|
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|
|
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|
|   |   |   |   |   |
|   |   |   |   | . | . |   |   |   |
|
|   |   |   |
|
|   |   |   |
|   |   | . |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |
|
Template Sequence |   |
F | S | E | E | Q | Q | A | I | W | Q | K | A | E | P | L | F | . |
. |
G | D | E | P | W | W | V | R | D | L | A | K | E | T | G | T | . |
D | E | Q | A | M | R | L | T | L | R | Q | A | A | Q | Q | G | I | I |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  | G | G | G |
| . | . | S | S | S |
|  |  |  |  |  |  |  |  |  | T | T |
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
487 | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | |
|
. | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | |
. | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|