Job Description P0A7C2 Confidence 94.52% Date Thu Jan 5 11:05:19 GMT 2012 Rank 108 Aligned Residues 110 % Identity 15% Template c2e1cA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:putative hth-type transcriptional regulator ph1519; PDBTitle: structure of putative hth-type transcriptional regulator ph1519/dna2 complex Resolution 2.10 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		A	L	T	A	R	Q	Q	E	V	F	D	L	I	R	D	H	I	S	Q	T	G	M	P	P	T	R	A	E	I	A	Q	R	L	G	F	R	S	P	N	A	A	E	E	H	L	K	A	L	A	R	K	G	V	I	E	.	I	V	S	G	A	S	R	G	I	R	L	L	Q	E	E	E	E	G	L	P	L	V	G	R
Query Conservation																																																									.
Alig confidence										.	.	.	.												.												.																				.
Template Conservation										.	.	.	.												.												.
Template Sequence		P	L	D	E	I	D	K	K	.	.	.	.	I	I	K	I	L	Q	N	D	G	K	A	.	P	L	R	E	I	S	K	I	T	G	L	.	A	E	S	T	I	H	E	R	I	R	K	L	R	E	S	G	V	I	K	K	F	T	A	I	I	D	P	E	A	L	G	Y	S	M	L	A	F	I	L	V	K	V	K	A
Template Known Secondary structure										.	.	.	.									T	T		.										T	S	.															T	T	S	S									G	G	G	G	T													T
Template Predicted Secondary structure										.	.	.	.												.												.
Template SS confidence
		24	.	.	.	.	.	30	.					.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	A	G	E	P	L	L	A	Q	Q	H	I	E	G	H	Y	Q	V	D	P	S	L	F	K	P	N	A	D	F	L	L	R	V	S	G	M	S	M
Query Conservation
Alig confidence																					.	.
Template Conservation																					.	.
Template Sequence		G	K	Y	S	E	V	A	S	N	L	A	K	Y	P	E	I	V	E	V	.	.	Y	E	T	T	G	D	Y	D	M	V	V	K	I	R	T	K	N	S
Template Known Secondary structure		T											T	S	T	T					.	.				S	S	S	S	S								S	S
Template Predicted Secondary structure																					.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.			.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions