Return to main results Retrieve Phyre Job Id

Job DescriptionP0A7C2
Confidence94.52%DateThu Jan 5 11:05:19 GMT 2012
Rank108Aligned Residues110
% Identity15%Templatec2e1cA_
PDB info PDB header:transcription/dnaChain: A: PDB Molecule:putative hth-type transcriptional regulator ph1519; PDBTitle: structure of putative hth-type transcriptional regulator ph1519/dna2 complex
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50....... ..60.........70.........80.
Predicted Secondary structure 















.























Query SS confidence 






















































.























Query Sequence  ALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIE. IVSGASRGIRLLQEEEEGLPLVGR
Query Conservation   

  
  
   
       
  

  


   
      
   
  
       .                        
Alig confidence 







....










.










.


















.























Template Conservation 


  
  ....

  
  
 
 .
   

   
 .
  

  

  
   
 
            
             
Template Sequence  PLDEIDKK. . . . IIKILQNDGKA. PLREISKITGL. AESTIHERIRKLRESGVIKKFTAIIDPEALGYSMLAFILVKVKA
Template Known Secondary structure 


....
TT
.
TS.
TTSS







GGGGT


T
Template Predicted Secondary structure 


....



.


.












Template SS confidence 















































































   24.....30. ........40.. .......50... ......60.........70.........80.........90.......
 
   82.......90.........100.........110.........120
Predicted Secondary structure 

























Query SS confidence 






































Query Sequence  VAAGEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGMSM
Query Conservation            
     
            
 
 
 



Alig confidence 


















..

















Template Conservation       
   
   
 
   ..    
  

   
     
Template Sequence  GKYSEVASNLAKYPEIVEV. . YETTGDYDMVVKIRTKNS
Template Known Secondary structure  T
TSTT..
SSSSSSS
Template Predicted Secondary structure 



..





Template SS confidence 






































   98.100.........110...... ...120.........130....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions