Job Description P0A7C2 Confidence 97.22% Date Thu Jan 5 11:05:19 GMT 2012 Rank 16 Aligned Residues 127 % Identity 11% Template c1y9qA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, hth_3 family; PDBTitle: crystal structure of hth_3 family transcriptional regulator2 from vibrio cholerae Resolution 1.90 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.												.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.										.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.
Query Sequence		Q	E	V	F	D	L	I	R	D	H	I	S	Q	T	G	M	P	P	T	R	A	E	I	A	Q	R	L	G	F	R	S	P	N	A	A	E	E	H	.	.	.	.	.	.	.	.	.	.	.	L	K	A	L	A	R	K	G	V	I	E	I	V	S	G	A	S	R	G	I	R	.	.	.	.	.	.	.	.	.	L
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.
Alig confidence																		.	.												.									.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.
Template Conservation																		.	.												.
Template Sequence		S	Q	I	A	N	Q	L	K	N	L	R	K	S	R	G	L	.	.	S	L	D	A	T	A	Q	L	T	G	V	.	S	K	A	X	L	G	Q	I	E	R	G	E	S	S	P	T	I	A	T	L	W	K	I	A	S	G	L	E	A	S	F	S	A	F	F	A	N	D	P	Q	L	L	S	S	E	R	S	F	P	D
Template Known Secondary structure															T	T		.	.										S	S	.										T	T		S															T			S	G	G	G	G	T	T	S	T								B		T	T
Template Predicted Secondary structure																		.	.												.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.						.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.
Query Sequence		L	Q	E	E	E	E	G	L	P	L	V	G	R	V	A	A	G	E	P	L	L	A	Q	Q	H	I	E	G	H	Y	Q	V	D	P	S	L	F	K	P	N	A	D	F	L	L	R	V	S	G	M	S	M	K	D	I	G	.	.	.	.	.	I	M	D	G	D	L	L	A	V	H	K	T	Q	D
Query Conservation																																																										.	.	.	.	.
Alig confidence																																																										.	.	.	.	.
Template Conservation
Template Sequence		D	L	N	X	K	I	H	T	L	F	P	Y	A	A	D	T	G	L	E	I	F	E	I	T	L	L	D	H	H	Q	Q	X	S	S	P	H	A	L	G	V	I	E	Y	I	H	V	L	E	G	I	X	K	V	F	F	D	E	Q	W	H	E	L	Q	Q	G	E	H	I	R	F	F	S	D	Q	P
Template Known Secondary structure			T	T											T	T	T	T										T	T									S	T	T										S							T	T							T	T								S	S	S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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