Job Description P0A7C2 Confidence 82.88% Date Thu Jan 5 11:05:19 GMT 2012 Rank 437 Aligned Residues 50 % Identity 20% Template c1l9uH_ PDB info PDB header:transcription Chain: H: PDB Molecule:sigma factor siga; PDBTitle: thermus aquaticus rna polymerase holoenzyme at 4 a2 resolution Resolution 4.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	A	L	T	A	R	Q	Q	E	V	F	D	L	I	R	D	H	I	S	Q	T	G	M	P	P	T	R	A	E	I	A	Q	R	L	G	F	R	S	P	N	A	A	E	E	H	L	K	A	L	A	R	K
Query Conservation
Alig confidence																										.	.												.
Template Conservation																										.	.												.
Template Sequence		L	S	K	L	S	E	R	E	A	M	V	L	K	L	R	K	G	L	I	D	G	R	E	H	.	.	T	L	E	E	V	G	A	Y	F	G	V	.	T	R	E	R	I	R	Q	I	E	N	K	A	L	R	K
Template Known Secondary structure		T	T	S	S		T	T	T	T					T	T	S	S	T	T	S	S				.	.							T	T	S		S	.
Template Predicted Secondary structure																										.	.												.
Template SS confidence
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.			.	.	.	400	.	.	.	.	.	.	.		.	.	410	.	.	.	.	.	.	.	.	.	420	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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