Job Description P0A7C2 Confidence 95.15% Date Thu Jan 5 11:05:19 GMT 2012 Rank 79 Aligned Residues 49 % Identity 18% Template c1h0mD_ PDB info PDB header:transcription/dna Chain: D: PDB Molecule:transcriptional activator protein trar; PDBTitle: three-dimensional structure of the quorum sensing protein2 trar bound to its autoinducer and to its target dna Resolution 3.0 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	L	T	A	R	Q	Q	E	V	F	D	L	I	R	D	H	I	S	Q	T	G	M	P	P	T	R	A	E	I	A	Q	R	L	G	F	R	S	P	N	A	A	E	E	H	L	K	A	L	A	R	K	G	V	I	E	I
Query Conservation
Alig confidence																				.	.	.	.	.	.	.												.
Template Conservation																				.	.	.	.	.	.	.												.
Template Sequence		A	W	L	D	P	K	E	A	T	Y	L	R	W	I	A	V	G	K	.	.	.	.	.	.	.	T	X	E	E	I	A	D	V	E	G	V	.	K	Y	N	S	V	R	V	K	L	R	E	A	X	K	R	F	D	V	R	S
Template Known Secondary structure																T	T	T		.	.	.	.	.	.	.									T	T		.																	T		S	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.												.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.								190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions