Return to main results Retrieve Phyre Job Id

Job DescriptionP60869
Confidence27.84%DateThu Jan 5 12:07:13 GMT 2012
Rank45Aligned Residues52
% Identity12%Templated1v6ba_
SCOP infoPDZ domain-like PDZ domain-like PDZ domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   216...220.........230.........240.........250.........260.........270.
Predicted Secondary structure 


























Query SS confidence 























































Query Sequence  RAYRVGPELVAWTDGKNLRELGIYRQTGCYIERIRRNGILANPDGDAVLQMGDEIA
Query Conservation      
 
   
 





 
          
  
 
 
    
     
  

 
 
Alig confidence 












.























...














Template Conservation   
 

       
.
  
 

       
 
  
  

... 
   
 
  

 

Template Sequence  DVRLLRIKKEGSL. DLALEGGVDSPVGKVVVSAVYEGG. . . AAERHGGVVKGDEIM
Template Known Secondary structure 
S
S

.

BTTSSS
S

TTS...
SS
TT
Template Predicted Secondary structure 




.











...





Template SS confidence 























































   18.20.........30 .........40.........50.... .....60.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions