Job Description P60869 Confidence 38.25% Date Thu Jan 5 12:07:13 GMT 2012 Rank 31 Aligned Residues 81 % Identity 16% Template d1i16a_ SCOP info PDZ domain-like PDZ domain-like Interleukin 16 Resolution UNK

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		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.			.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure																																																	.	.
Query SS confidence																																																	.	.
Query Sequence		D	L	Q	T	S	A	Q	Q	I	A	R	E	R	G	L	D	T	D	A	N	R	K	V	Y	L	P	V	I	R	A	Y	R	V	G	P	E	L	V	A	W	T	D	G	K	N	L	R	.	.	E	L	G	I	Y	R	Q	T	G	C	Y	I	E	R	I	R	R	N	G	I	L	A	N	P	D	G	D	A	V	L	Q
Query Conservation																																																	.	.
Alig confidence																																																	.	.																					.	.	.
Template Conservation																																																																							.	.	.
Template Sequence		M	P	D	L	N	S	S	T	D	S	A	A	S	A	S	A	A	S	D	V	S	V	E	S	T	A	E	A	T	V	C	T	V	T	L	E	K	M	S	A	G	L	G	F	S	L	E	G	G	K	G	S	L	H	G	D	K	P	L	T	I	N	R	I	F	K	G	A	A	.	.	.	S	E	Q	S	E	T	V	Q
Template Known Secondary structure				S	S			S	S	S	S								S	S			S			S	S	S										T	T	S	S	S	T	T										S	S	S											S	S			.	.	.		S	S	S
Template Predicted Secondary structure																																																																							.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.				70	.	.	.	.	.	.	.
		266	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	D	E	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	G	D	E	I	L
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions