Job Description P60869 Confidence 30.66% Date Thu Jan 5 12:07:13 GMT 2012 Rank 38 Aligned Residues 115 % Identity 19% Template c4a8aI_ PDB info PDB header:hydrolase/hydrolase Chain: I: PDB Molecule:periplasmic ph-dependent serine endoprotease degq; PDBTitle: asymmetric cryo-em reconstruction of e. coli degq 12-mer in complex2 with lysozyme Resolution 14.20 Å

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		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.						.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.
Query SS confidence																																											.	.	.	.	.
Query Sequence		R	E	L	G	I	Y	R	Q	T	G	C	Y	I	E	R	I	R	R	N	G	I	L	A	N	P	D	G	D	A	V	L	Q	M	G	D	E	I	A	L	V	G	.	.	.	.	.	Y	P	D	A	H	A	R	L	D	P	S	F	R	N	G	K	E	V	F	D	R	D	L	L	D	M	R	I	V	T	E	E	V	V
Query Conservation																																											.	.	.	.	.
Alig confidence																					.	.	.	.																			.	.	.	.	.
Template Conservation																					.	.	.	.
Template Sequence		K	A	F	N	L	D	V	Q	R	G	A	F	V	S	E	V	L	P	G	.	.	.	.	S	G	S	A	K	A	G	V	K	A	G	D	I	I	T	S	L	N	G	K	P	L	N	S	F	A	E	L	R	S	R	I	A	T	T	E	P	G	T	K	V	K	L	G	L	L	R	N	G	K	P	L	E	V	E	V	S
Template Known Secondary structure				S			T	T	S	S		B	B						T	T	.	.	.	.	S	G	G	G	S	S				T	T						S	S	S	S	B			T									T	T	S		S	S									T	T	S	S
Template Predicted Secondary structure																					.	.	.	.
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.					.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
		309			310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.			.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure			.	.																	.	.
Query SS confidence			.	.																	.	.
Query Sequence		V	.	.	K	N	H	N	A	V	G	K	R	L	A	Q	L	K	L	T	.	.	D	H	G	C	F	L	N	R	V	I	R	S	Q	I	E	M	P	I	D	D	N	V	V	L	N	K	G	D	V	L	Q
Query Conservation			.	.																	.	.
Alig confidence			.	.																	.	.																				.	.	.	.
Template Conservation																																										.	.	.	.
Template Sequence		A	E	M	I	T	P	A	L	E	G	A	T	L	S	D	G	Q	L	K	D	G	G	K	G	I	K	I	D	E	V	V	K	G	S	P	A	A	Q	A	G	.	.	.	.	L	Q	K	D	D	V	I	I
Template Known Secondary structure					S	S	S	S				S			B		T	T	T	T	S	S			S		B						S	S	S	S					S	.	.	.	.			T	T
Template Predicted Secondary structure																																										.	.	.	.
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380					.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions