Job Description P60869 Confidence 70.30% Date Thu Jan 5 12:07:13 GMT 2012 Rank 16 Aligned Residues 146 % Identity 18% Template c3r0hA_ PDB info PDB header:peptide binding protein Chain: A: PDB Molecule:inactivation-no-after-potential d protein; PDBTitle: structure of inad pdz45 in complex with ng2 peptide Resolution 2.60 Å

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		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.									.
Predicted Secondary structure																																				.																																					.	.	.	.	.	.	.	.
Query SS confidence																																				.																																					.	.	.	.	.	.	.	.
Query Sequence		D	A	N	R	K	V	Y	L	P	V	I	R	A	Y	R	V	G	P	E	L	V	A	W	T	D	G	K	N	L	R	E	L	G	I	.	Y	R	Q	T	G	C	Y	I	E	R	I	R	R	N	G	I	L	A	N	P	D	G	D	A	V	L	Q	M	G	D	E	I	A	L	V	G	.	.	.	.	.	.	.	.	Y
Query Conservation																																				.																																					.	.	.	.	.	.	.	.
Alig confidence																																				.																	.	.	.																		.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.
Template Sequence		Q	E	P	A	T	A	E	I	K	P	N	K	K	I	L	I	E	L	K	V	E	K	K	P	M	G	V	I	V	C	G	G	K	N	N	H	V	T	T	G	C	V	I	T	H	V	Y	P	E	G	Q	.	.	.	V	A	A	D	K	R	L	K	I	F	D	H	I	C	D	I	N	G	T	P	I	H	V	G	S	M
Template Known Secondary structure		.		T	T	T					T	T	S									T	T	S										S	S	S	S			S									T	T	S		.	.	.									T	T							T	T					G	G	G	S
Template Predicted Secondary structure																																																					.	.	.
Template SS confidence
		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.				.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.		.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		P	D	A	H	A	R	L	D	P	S	F	R	N	G	K	E	V	F	D	R	D	L	L	D	M	R	I	V	T	E	E	V	V	V	K	N	H	N	A	V	G	K	R	L	A	Q	L	K	L	T	.	D	H	G	C	F	L	N	R	V	I	R	S	Q	I	E	M	P	I	D	D	N	V	V	L	N	K	G	D	V
Query Conservation																																																				.
Alig confidence																																																				.																				.	.	.
Template Conservation																																																																								.	.	.
Template Sequence		T	T	L	K	V	H	Q	L	F	H	T	T	Y	E	K	A	V	T	L	T	V	F	R	A	D	P	P	E	L	E	K	F	N	V	D	L	M	K	K	A	G	K	E	L	G	L	S	L	S	P	N	E	I	G	C	T	I	A	D	L	I	Q	G	Q	Y	P	E	I	D	S	.	.	.	K	L	Q	R	G	D	I
Template Known Secondary structure												S			S	S										S	S														T	T											S	S									T	T	S							.	.	.				T	T
Template Predicted Secondary structure																																																																								.	.	.
Template SS confidence
		552	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.				.	.	.	.	.	.	.
		355	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		629	630

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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