Job Description P60869 Confidence 99.28% Date Thu Jan 5 12:07:13 GMT 2012 Rank 4 Aligned Residues 75 % Identity 20% Template c3jxoB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:trka-n domain protein; PDBTitle: crystal structure of an octomeric two-subunit trka k+ channel ring2 gating assembly, tm1088a:tm1088b, from thermotoga maritima Resolution 1.55 Å

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		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	L	D	M	R	I	V	T	E	E	V	V	V	K	N	H	N	A	V	G	K	R	L	A	Q	L	K	L	T	D	H	G	C	F	L	N	R	V	I	R	S	Q	I	E	M	P	I	D	D	N	V	V	L	N	K	G	D	V	L	Q	V	S	G	D	A	R	R	V	K	T	I	A	D	R	I
Query Conservation
Alig confidence																																	.
Template Conservation																																	.
Template Sequence		P	L	E	Q	G	I	E	F	L	S	V	N	V	E	E	D	S	P	V	V	G	K	K	L	K	D	L	P	L	P	R	.	D	S	I	I	A	A	I	V	R	G	G	V	L	V	V	P	R	G	D	T	E	I	L	S	G	D	K	L	Y	V	I	V	S	A	E	A	K	E	T	V	E	E	T	L
Template Known Secondary structure					T	T										T	T		T	T	T	T		B	G	G	G					T	.	T									T	T							T	T		B			T	T									T	T	T
Template Predicted Secondary structure																																	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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