Job Description P60869 Confidence 28.55% Date Thu Jan 5 12:07:13 GMT 2012 Rank 42 Aligned Residues 57 % Identity 18% Template c2yt7A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:amyloid beta a4 precursor protein-binding family PDBTitle: solution structure of the pdz domain of amyloid beta a42 precursor protein-binding family a member 3 Resolution UNK

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		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.		.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		Y	L	P	V	I	R	A	Y	R	V	G	P	E	L	V	A	W	T	D	G	K	N	L	R	E	L	G	I	Y	R	Q	.	T	G	C	Y	I	E	R	I	R	R	N	G	I	L	A	N	P	D	G	D	A	V	L	Q	M	G	D	E	I	A
Query Conservation																																	.
Alig confidence																				.													.													.	.	.
Template Conservation																				.																										.	.	.
Template Sequence		S	G	D	N	C	R	E	V	H	L	E	K	R	R	G	E	G	L	.	G	V	A	L	V	E	S	G	W	G	S	L	L	P	T	A	V	I	A	N	L	L	H	G	G	.	.	.	P	A	E	R	S	G	A	L	S	I	G	D	R	L	T
Template Known Secondary structure		T	T												T	T				.										S	S	S	S										T	T	S	.	.	.	T	T	G	G	G	S	S			T	T
Template Predicted Secondary structure																				.																										.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.				.	50	.	.	.	.	.	.	.	.	.	60	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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