Job Description P60869 Confidence 34.91% Date Thu Jan 5 12:07:13 GMT 2012 Rank 34 Aligned Residues 151 % Identity 16% Template c2xkxB_ PDB info PDB header:structural protein Chain: B: PDB Molecule:disks large homolog 4; PDBTitle: single particle analysis of psd-95 in negative stain Resolution 22.9 Å

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		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.					.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.																																								.	.	.
Query SS confidence																																				.	.	.	.																																								.	.	.
Query Sequence		D	T	D	A	N	R	K	V	Y	L	P	V	I	R	A	Y	R	V	G	P	E	L	V	A	W	T	D	G	K	N	L	R	E	L	.	.	.	.	G	I	Y	R	Q	T	G	C	Y	I	E	R	I	R	R	N	G	I	L	A	N	P	D	G	D	A	V	L	Q	M	G	D	E	I	A	L	V	G	Y	.	.	.
Query Conservation																																				.	.	.	.																																								.	.	.
Alig confidence																																				.	.	.	.																		.	.	.																				.	.	.
Template Conservation																																																									.	.	.
Template Sequence		E	A	P	G	Y	V	N	G	T	E	G	E	M	E	Y	E	E	I	T	L	E	R	G	N	S	G	L	G	F	S	I	A	G	G	T	D	N	P	H	I	G	D	D	P	S	I	F	I	T	K	I	I	P	G	G	.	.	.	A	A	A	Q	D	G	R	L	R	V	N	D	S	I	L	F	V	N	E	V	D	V
Template Known Secondary structure		S	S	S			S	S				S	S												S	S		S	S						B	T	T	B			S	S	S	S										T	T	S	.	.	.					S					T	T						S	S	S			G
Template Predicted Secondary structure																																																									.	.	.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100				.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
							276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.		.		.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																																																			.		.
Query SS confidence		.	.	.	.	.																																																			.		.
Query Sequence		.	.	.	.	.	P	D	A	H	A	R	L	D	P	S	F	R	N	G	K	E	V	F	D	R	D	L	L	D	M	R	I	V	T	E	E	V	V	V	K	N	H	N	A	V	G	K	R	L	A	Q	L	K	L	T	.	D	.	H	G	C	F	L	N	R	V	I	R	S	Q	I	E	M	P	I	D	D	N	V	V
Query Conservation		.	.	.	.	.																																																			.		.
Alig confidence		.	.	.	.	.																																																			.		.
Template Conservation
Template Sequence		R	E	V	T	H	S	A	A	V	E	A	L	K	E	A	G	S	I	V	R	L	Y	V	M	R	R	K	P	P	A	E	K	V	M	E	I	K	L	I	K	G	P	K	G	L	G	F	S	I	A	G	G	V	G	N	Q	H	I	P	G	D	N	S	I	Y	V	T	K	I	I	E	G	G	A	A	H	K	D	G	R
Template Known Secondary structure		G	G													T		S	S										S														S	S	S	S	S	S					T	B	T	T			S	T	T			S								S	S	S	T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		349	350	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	K	G	D	V	L	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	I	G	D	K	I	L
Template Known Secondary structure				T	T
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions