Job Description P60869 Confidence 16.26% Date Thu Jan 5 12:07:13 GMT 2012 Rank 83 Aligned Residues 51 % Identity 24% Template c2vspA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:pdz domain-containing protein 1; PDBTitle: crystal structure of the fourth pdz domain of pdz domain-2 containing protein 1 Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	I	R	A	Y	R	V	G	P	E	L	V	A	W	T	D	G	K	N	L	R	E	L	G	I	Y	R	Q	T	G	C	Y	I	E	R	I	R	R	N	G	I	L	A	N	P	D	G	D	A	V	L	Q	M	G	D	E	I	A
Query Conservation
Alig confidence																.	.							.	.																		.	.	.	.
Template Conservation																.	.							.	.																		.	.	.	.
Template Sequence		M	K	P	K	L	C	R	L	A	K	G	E	N	G	.	.	Y	G	F	H	L	N	.	.	A	I	R	G	L	P	G	S	F	I	K	E	V	Q	K	G	G	.	.	.	.	P	A	D	L	A	G	L	E	D	E	D	V	I	I
Template Known Secondary structure												B	T	T	B	.	.	T	S				B	.	.			T	T		S			B		.				T	T	S	.	.	.	.					T	T			T	T
Template Predicted Secondary structure																.	.							.	.																		.	.	.	.
Template SS confidence
		374	.	.	.	.	.	380	.	.	.	.	.	.	.			.	.	390	.	.	.			.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410					.	.	.	.	.	.	.	.	.	420	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions