Job Description P60869 Confidence 16.45% Date Thu Jan 5 12:07:13 GMT 2012 Rank 82 Aligned Residues 55 % Identity 20% Template c2jilA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:glutamate receptor interacting protein-1; PDBTitle: crystal structure of 2nd pdz domain of glutamate receptor2 interacting protein-1 (grip1) Resolution 1.5 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

214

.

.

.

.

.

220

.

.

.

.

.

.

.

.

.

230

.

.

.

.

.

.

.

.

.

240

.

.

.

.

.

.

.

.

.

250

.

.

.

.

.

.

.

.

.

260

.

.

.

.

.

.

.

.

.

270

.

Predicted Secondary structure

.

Query SS confidence

.

Query Sequence

V

I

R

A

Y

R

V

G

P

E

L

V

A

W

T

D

G

K

N

L

R

E

L

G

.

I

Y

R

Q

T

G

C

Y

I

E

R

I

R

R

N

G

I

L

A

N

P

D

G

D

A

V

L

Q

M

G

D

E

I

A

Query Conservation

.

Alig confidence

.

.

.

.

Template Conservation

.

.

.

Template Sequence

S

M

R

T

V

E

V

T

L

H

K

E

G

N

T

F

G

F

V

I

R

G

G

A

H

D

D

R

S

R

P

V

V

I

T

S

V

R

P

G

G

P

A

D

R

.

.

.

E

G

T

I

K

P

G

D

R

L

L

Template Known Secondary structure

B

T

T

B

S

S

T

T

S

.

.

.

T

T

Template Predicted Secondary structure

.

.

.

Template SS confidence

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions