Return to main results Retrieve Phyre Job Id

Job DescriptionP52006
Confidence99.88%DateThu Jan 5 12:04:54 GMT 2012
Rank18Aligned Residues117
% Identity25%Templated1ppva_
SCOP infoNudix Nudix IPP isomerase-like
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30...... ...40.........50.........60.........70.........80.
Predicted Secondary structure 













.


















Query SS confidence 

































.












































Query Sequence  QRTIVCPLIQNDGAYLLCKMADDRGVFPGQWAIS. GGGVEPGERIEEALRREIREELGEQLLLTEITPWTFSDDIRTKTY
Query Conservation     

  

     


  
        
 
  
.

 
  


   

 


 

 

                     
Alig confidence 

































.


































.....




Template Conservation 
 
  
 
    
 


  
   
   

 
    




 


  


 


 

 

           .....     
Template Sequence  HLAFSSWLFNAKGQLLVTRRALSKKAWPGVWTNSVCGHPQLGESNEDAVIRRCRYELGVEITPPESIYPD. . . . . FRYRA
Template Known Secondary structure 

TT


TT
SSSTT

S


TT




B


TT.....
Template Predicted Secondary structure 































.....
Template SS confidence 















































































   32.......40.........50.........60.........70.........80.........90.........100. .....
 
   82.......90.........100.........110.........120....
Predicted Secondary structure 






















Query SS confidence 










































Query Sequence  ADGRKEEIYMIYLIFDCVSANREVKINEEFQDYAWVKPEDLVH
Query Conservation                              
     
    

  
Alig confidence 










































Template Conservation                              

    

   

  
Template Sequence  TDPSGIVENEVCPVFAARTTSALQINDDEVMDYQWCDLADVLH
Template Known Secondary structure 
TTS


B
S




TTT
Template Predicted Secondary structure 













Template SS confidence 










































   107..110.........120.........130.........140.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions