Return to main results Retrieve Phyre Job Id

Job DescriptionP52006
Confidence99.84%DateThu Jan 5 12:04:54 GMT 2012
Rank39Aligned Residues131
% Identity12%Templatec3fcmA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:hydrolase, nudix family; PDBTitle: crystal structure of a nudix hydrolase from clostridium2 perfringens
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10..... ....20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 


.





























Query SS confidence 












.

































































Query Sequence  QRTIVCPLIQNDG. AYLLCKMADDRGVFPGQWAISGGGVEPGERIEEALRREIREELGEQLLLTEITPWTFSDDIRTKTY
Query Conservation     

  

    . 


  
        
 
  


 
  


   

 


 

 

                     
Alig confidence 












.









.....


















































Template Conservation 
 



 
      




 
   .....  
  





  
    

 


 




                     
Template Sequence  HLTSSAFAVNKERNKFLXIHHNIY. . . . . NSWAWTGGHSDNEKDQLKVAIKELKEETGVKNPTPLLDKAFALDVLTVNGH
Template Known Secondary structure 
TTS
TTT.....T

TT

B

SS
S
SS
S

Template Predicted Secondary structure 










.....


























Template SS confidence 















































































   43......50.........60...... ...70.........80.........90.........100.........110.......
 
   82.......90.........100.........110.........120.........130........
Predicted Secondary structure 


























Query SS confidence 
























































Query Sequence  ADGRKEEIYMIYLIFDCVSANREVKINEEFQDYAWVKPEDLVHYDLNVATRKTLRLK
Query Conservation                              
     
    

            
 

Alig confidence 
























































Template Conservation           
                  
     
    

           
  

Template Sequence  IKRGKYVSSHLHLNLTYLIECSEDETLXLKEGVXWIPFNEISKYCSEPHXIPIYEKL
Template Known Secondary structure  TT



TTS






GGG


GGG
Template Predicted Secondary structure 



















Template SS confidence 
























































   118.120.........130.........140.........150.........160.........170....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions