Return to main results Retrieve Phyre Job Id

Job DescriptionP52006
Confidence99.85%DateThu Jan 5 12:04:54 GMT 2012
Rank31Aligned Residues136
% Identity18%Templatec3f6aA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:hydrolase, nudix family; PDBTitle: crystal structure of a hydrolase, nudix family from2 clostridium perfringens
Resolution2.02 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.
Predicted Secondary structure 




























.........
Query SS confidence 






































































. . . . . . . . .
Query Sequence  MRQRTIVCPLIQNDGAYLLCKMADDRGVFPGQWAISGGGVEPGERIEEALRREIREELGEQLLLTEITPWT. . . . . . . . .
Query Conservation 

   

  

     


  
        
 
  


 
  


   

 


 

 

           .........
Alig confidence 
























.....








































.........
Template Conservation     
      
     


      .....     


 

 


   

 


 




                    
Template Sequence  LNRHFTVSVFIVCKDKVLLHLHKKA. . . . . KKXLPLGGHIEVNELPEEACIREAKEEAGLNVTLYNPIDINLKKSCDLSG
Template Known Secondary structure 

S
TT
SSS.....




TT










TT
Template Predicted Secondary structure 








.....






















Template SS confidence 















































































   1........10.........20..... ....30.........40.........50.........60.........70.....
 
   72.......80.........90.........100.........110.........120.........130. ........140.
Predicted Secondary structure  ..
































..


Query SS confidence  . .



























































. .









Query Sequence  . . FSDDIRTKTYADGRKEEIYMIYLIFDCVSANREVKINEEFQDYAWVKPEDLVHYDLNVAT. . RKTLRLKGLL
Query Conservation  ..                                      
     
    

         ..   
 


  
Alig confidence  ..



























































..









Template Conservation                                          
     
    

                

   
Template Sequence  EKLLINPIHTILGDVSPNHSHIDFVYYATTTSFETSPEIGESKILKWYSKEDLKNAHNIQENILVXATEALDLL
Template Known Secondary structure 






S
SSSSS

S
S




TTS



SSSSTT
SSS

Template Predicted Secondary structure 























Template SS confidence 









































































   76...80.........90.........100.........110.........120.........130.........140.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions