 |
Job Description | P52006 | Confidence | 99.63% | Date | Thu Jan 5 12:04:54 GMT 2012 |
Rank | 70 | Aligned Residues | 116 |
% Identity | 18% | Template | c3bm4B_ |
PDB info |
PDB header:hydrolase | Chain: B: PDB Molecule:adp-sugar pyrophosphatase; |
PDBTitle: crystal structure of human adp-ribose pyrophosphatase nudt52 in complex with magnesium and ampcpr
|
Resolution | 2.00 Å |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | |
|
|
|
. | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | R | Q | R | T | I | V | C | P | L | I | Q | N | D | G | . |
. |
. |
. |
A | Y | L | L | C | K | M | A | D | D | R | G | V | F | P | G | Q | W | A | I | S | G | G | G | V | E | P | G | E | R | I | E | E | A | L | R | R | E | I | R | E | E | L | G | E | Q | L | L | L | T | E | I | T | P | W | T | F | S | D | D | I |
Query Conservation |   |
|
|   |   |   |
|
|   |   |
|
|   |   |   |   | . | . | . | . |   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |
|   |
|   |   |
|
|
|   |
|   |   |
|
|
|   |   |   |
|
|   |
|
|
|   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
Template Conservation |   |
  |   |   |   |
|
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |
| . |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|
|   |
|
|   |   |   |   |
|
|   |
|
|
|   |
|
|
|
|   |   |   |   |   |   |   |   |
|   |   |   | . | . | . | . | . |
Template Sequence |   |
Q | T | A | D | G | V | A | V | I | P | V | L | Q | R | T | L | H | Y | E | C | I | V | L | V | K | Q | F | R | . |
P | P | M | G | G | Y | C | I | E | F | P | A | G | L | I | D | D | G | E | T | P | E | A | A | A | L | R | E | L | E | E | E | T | G | Y | K | G | D | I | A | E | C | S | P | A | V | . |
. |
. |
. |
. |
Template Known Secondary structure |   |
T | S |
| S |  |  |  |  |  |  |  |  |  |
| T | T | S |
|
|  |  |  |  |  |  |  |  |  | . | T | T | T | T |  |  |  |  |  |
|
|  |  |  |
|
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  | . | . | . | . | . |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  | . |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |
|  |  |  |  |  |  |  |  | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
57 | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | |
. | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | |
|
|
|
|
  |
  |   |
77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | |
|
|
|
. | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | T | K | T | Y | A | D | G | R | K | E | E | I | Y | M | I | Y | L | I | F | D | C | V | S | A | N | . |
. |
. |
. |
R | E | V | K | I | N | E | E | F | Q | D | Y | A | W | V | K | P | E | D | L | V | H |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |
|
|   |   |
Alig confidence |   |
. | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |
|
|   |   |   |
|
|   |   |
Template Sequence |   |
. |
. |
C | M | D | P | G | L | S | N | C | T | I | H | I | V | T | V | T | I | N | G | D | D | A | E | N | A | R | P | K | P | K | P | G | D | G | E | F | V | E | V | I | S | L | P | K | N | D | L | L | Q |
Template Known Secondary structure |   |
. | . |  | S |
| T | T | T | B |
|
|  |  |  |  |  |  |  |  |  |  | T | T | S | G | G | G | T | S |
|
|
|
|
|
| T | T |
|
|
|  |  |  |  |  |  | G | G | G |  |  |  |
Template Predicted Secondary structure |   |
. | . |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
131 | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|