Job Description P52006 Confidence 99.81% Date Thu Jan 5 12:04:54 GMT 2012 Rank 47 Aligned Residues 123 % Identity 21% Template c2i6kA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:isopentenyl-diphosphate delta-isomerase 1; PDBTitle: crystal structure of human type i ipp isomerase complexed2 with a substrate analog Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.										.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																																					.											.	.	.	.	.	.	.	.	.
Query SS confidence																																					.											.	.	.	.	.	.	.	.	.
Query Sequence		M	R	Q	R	T	I	V	C	P	L	I	Q	N	D	G	A	Y	L	L	C	K	M	A	D	D	R	G	V	F	P	G	Q	W	A	I	.	S	G	G	G	V	E	P	G	E	R	.	.	.	.	.	.	.	.	.	I	E	E	A	L	R	R	E	I	R	E	E	L	G	E	Q	L	L	L	T	E	I	T	P	W
Query Conservation																																					.											.	.	.	.	.	.	.	.	.
Alig confidence																																					.											.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	L	H	R	A	F	S	V	F	L	F	N	T	E	N	K	L	L	L	Q	Q	R	S	D	A	K	I	T	F	P	G	C	F	T	N	T	C	C	S	H	P	L	S	N	P	A	E	L	E	E	S	D	A	L	G	V	R	R	A	A	Q	R	R	L	K	A	E	L	G	I	P	L	E	E	V	P	P	E	E	I
Template Known Secondary structure														T	T										T	T		S	S	S	T	T				S	S						B	S	S	T	T	T	S			G	G	G																			G	G	G	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	S	D	D	I	R	T	K	T	Y	A	D	G	R	K	E	E	I	Y	M	I	Y	L	I	F	D	C	V	S	A	N	R	E	V	K	I	N	E	E	F	Q	D	Y	A	W	V	K	P	E	D	L	V	H
Query Conservation
Alig confidence																						.
Template Conservation																						.
Template Sequence		N	Y	L	T	R	I	H	Y	K	A	Q	S	D	G	I	W	G	E	H	E	.	I	D	Y	I	L	L	V	R	X	N	V	T	L	N	P	D	P	N	E	I	K	S	Y	C	Y	V	S	K	E	E	L	K	E
Template Known Secondary structure													S	S	S	S	B					.																	T	T	T
Template Predicted Secondary structure																						.
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions