Job Description P0A6E4 Confidence 88.67% Date Thu Jan 5 11:02:56 GMT 2012 Rank 66 Aligned Residues 129 % Identity 22% Template c3u9sE_ PDB info PDB header:ligase Chain: E: PDB Molecule:methylcrotonyl-coa carboxylase, alpha-subunit; PDBTitle: crystal structure of p. aeruginosa 3-methylcrotonyl-coa carboxylase2 (mcc) 750 kd holoenzyme, coa complex Resolution 3.50 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	I	G	I	A	F	S	G	G	L	D	T	S	A	A	L	L	W	M	R	Q	K	G	A	V	P	Y	A	Y	T	A	N	L	G	Q	P	D	E	E	D	Y	D	A	I	P	R	R	A	M	E	Y	G	A	E	N	A	R	L	I	D	C	R	K	Q	L	V	A	E	G	I	A	A	I	Q	C	G	A	F	H
Query Conservation
Alig confidence													.																												.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.																												.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	R	L	L	V	A	N	R	G	E	I	.	A	C	R	V	M	R	S	A	R	A	L	G	I	G	S	V	A	V	H	S	D	I	D	R	H	A	R	.	.	.	.	.	.	.	.	.	H	V	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	I	A	V
Template Known Secondary structure		S											.											T	T									S	T	T	S	S		S	.	.	.	.	.	.	.	.	.	T	T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure													.																												.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.										.	.	90	.																								.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	T	T	G	G	L	T	Y	F	N	T	T	P	L	G	R	A	V	T	G	T	M	L	V	A	A	M	K	E	D	G	V	N	I	W	G	D	G	S	T	Y	K	G	N	D	I	E	R	F	Y	R	Y	G	L	L	T	N	A	E	L	Q	I	Y	K	P	W	L	D	T	D	F	I	D	E	L	G	G	R	H	E
Query Conservation
Alig confidence		.	.	.	.	.	.																																		.	.	.																								.	.
Template Conservation		.	.	.	.	.	.																																		.	.	.																								.	.
Template Sequence		.	.	.	.	.	.	D	L	G	G	A	K	P	A	D	S	Y	L	R	G	D	R	I	I	A	A	A	L	A	S	G	A	Q	A	I	H	P	G	Y	.	.	.	G	F	L	S	E	N	A	D	F	A	R	A	C	E	E	A	G	L	L	F	L	G	P	.	.	P	A	A	A	I	D	A	M	G	S	K	S	A
Template Known Secondary structure		.	.	.	.	.	.					S	S	S	T	T	T	T	T												T	T								S	.	.	.	S	T	T	S	S		T								T	T	T				S	S	S	.	.								T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.																																		.	.	.																								.	.
Template SS confidence
								97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.				130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.			.	.	.	.	.	.	.	160	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	E	F	M	I	A	C	G	F	D	Y	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	A	L	M	E	E	A	G	V	P	L	V
Template Known Secondary structure								T	T	T
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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