Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6E4
Confidence59.74%DateThu Jan 5 11:02:56 GMT 2012
Rank113Aligned Residues162
% Identity10%Templatec3sjnB_
PDB info PDB header:lyaseChain: B: PDB Molecule:mandelate racemase/muconate lactonizing protein; PDBTitle: crystal structure of enolase spea_3858 (target efi-500646) from2 shewanella pealeana with magnesium bound
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910...... ...20..... ....30.........40..... ....50.........60.........70....... ..80
Predicted Secondary structure 



.


....




.








..
Query SS confidence 







.








. . . .



















.































. .


Query Sequence  PVGQRIGI. AFSGGLDTS. . . . AALLWMRQKGAVPYAYTANL. GQPDEEDYDAIPRRAMEYGAENARLIDCRKQL. . VAE
Query Conservation    
 



.
 






....


  


 
 

 

 

 .

  


 
 
   
  


    


 



.. 
 
Alig confidence 







.








....



















.































..


Template Conservation          
         
            
    


 
    
   
   
  

   
    
 



        
Template Sequence  KYRDKIRCYGTFIPADKPEDNVAIVQGLKDQGFSSIKFGGGVMGDDPDTDYAIVKAVREAAGPEMEVQIDLASKWHTCGH
Template Known Secondary structure 
S
S


SSGGGGT
SSTTTTT

SSS
TTTT
S
Template Predicted Secondary structure 




































Template SS confidence 















































































   129130.........140.........150.........160.........170.........180.........190.........200........
 
   81........90.........100.........110.........120.........130.........140.........150.........160
Predicted Secondary structure 








































Query SS confidence 















































































Query Sequence  GIAAIQCGAFHNTTGGLTYFNTTPLGRAVTGTMLVAAMKEDGVNIWGDGSTYKGNDIERFYRYGLLTNAELQIYKPWLDT
Query Conservation   
 

 
 
 
       


 
 


      
 
 
   

  














 
    
 
 
  


 

 
Alig confidence 










......

























.







..

























Template Conservation 
      
   ...... 
  



    
      
     
.


 


 ..         
     
    
    
Template Sequence  SAMMAKRLEEF. . . . . . NLNWIEEPVLADSLISYEKLSRQVSQ. KIAGGESL. . TTRYEFQEFITKSNADIVQPDITRCG
Template Known Secondary structure  TTTT......T
S
SS
TT
TT
SS.
TT
..


S

BTTTSS
Template Predicted Secondary structure 
......












.



..












Template SS confidence 















































































   209210......... 220.........230.........240..... ....250... ......260.........270.........
 
   161........170.........180...
Predicted Secondary structure 







Query SS confidence 






















Query Sequence  DFIDELGGRHEMSEFMIACGFDY
Query Conservation       
 

 
 



   


 
Alig confidence 





....












Template Conservation 

    ....     
   

  
Template Sequence  GITEMK. . . . KIYDIAQMNGTQL
Template Known Secondary structure  ....TT
Template Predicted Secondary structure 
....



Template SS confidence 






















   280..... ....290........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions