Job Description P0A6E4 Confidence 53.86% Date Thu Jan 5 11:02:56 GMT 2012 Rank 127 Aligned Residues 108 % Identity 15% Template c3s3tD_ PDB info PDB header:chaperone Chain: D: PDB Molecule:nucleotide-binding protein, universal stress protein uspa PDBTitle: universal stress protein uspa from lactobacillus plantarum Resolution 1.90 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.					.	.	.	.	.	40	.	.	.							.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.										.	.	.	.	.	.
Query SS confidence																												.	.	.	.										.	.	.	.	.	.
Query Sequence		P	V	G	Q	R	I	G	I	A	F	S	G	G	L	D	T	S	A	A	L	L	W	M	R	Q	K	.	.	.	.	G	A	V	P	Y	A	Y	T	A	.	.	.	.	.	.	N	L	G	Q	P	D	E	E	D	Y	D	A	I	P	R	R	A	M	E	Y	G	A	E	N	A	R	L	I	D	C	R	K	Q	L	V
Query Conservation																												.	.	.	.										.	.	.	.	.	.
Alig confidence																												.	.	.	.										.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	R	Y	T	N	I	L	V	P	V	D	S	S	D	A	A	Q	A	A	F	T	E	A	V	N	I	A	Q	R	H	Q	A	N	L	T	A	L	Y	V	V	D	D	S	A	Y	H	T	P	A	L	D	P	V	L	S	E	L	L	D	A	E	A	A	H	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure													S	S																		T																	G	G	G																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	G	I	A	A	I	Q	C	G	A	F	H	N	T	T	G	G	L	T	Y	F	N	T	T	P	L	G	R	A	V	T	G	T	M	L	V	A	A	M	K	E	D	G	V	N	I	W	G	D	G	S	T	Y	K	G
Query Conservation
Alig confidence																														.	.	.
Template Conservation																														.	.	.
Template Sequence		K	D	A	X	R	Q	R	Q	Q	F	V	A	T	T	S	A	P	N	L	K	T	E	I	S	Y	G	I	P	.	.	.	K	H	T	I	E	D	Y	A	K	Q	H	P	E	I	D	L	I	V	L	G	A	T	G	T	N
Template Known Secondary structure														T	S	S											S			.	.	.											S	T	T								S			S	S
Template Predicted Secondary structure																														.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.				.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions