Job Description P0A6E4 Confidence 99.30% Date Thu Jan 5 11:02:56 GMT 2012 Rank 38 Aligned Residues 157 % Identity 11% Template c3q4gA_ PDB info PDB header:ligase Chain: A: PDB Molecule:nh(3)-dependent nad(+) synthetase; PDBTitle: structure of nad synthetase from vibrio cholerae Resolution 2.40 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.												.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.																																														.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.																																														.	.
Query Sequence		Q	R	I	G	I	A	F	S	G	G	L	D	T	S	A	A	L	L	W	M	R	Q	.	.	.	.	.	.	.	.	.	.	.	K	G	A	V	P	Y	A	Y	T	A	N	L	G	Q	P	D	E	E	D	Y	D	A	I	P	R	R	A	M	E	Y	G	A	E	N	A	R	L	I	D	C	R	K	Q	L	V	.	.
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.																																														.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.																	.																.													.	.
Template Conservation																																																			.																.
Template Sequence		K	S	L	V	L	G	I	S	G	G	V	D	S	T	T	C	G	R	L	A	Q	L	A	V	E	E	L	N	Q	Q	H	N	T	T	E	Y	Q	F	I	A	V	R	L	P	Y	G	E	Q	K	.	D	E	D	E	A	Q	L	A	L	S	F	I	R	P	T	.	H	S	V	S	V	N	I	K	A	G	V	D	G	L
Template Known Secondary structure										S	S																					T	T		S											S	S	S		S	.															S	.
Template Predicted Secondary structure																																																			.																.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.
			79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	A	E	G	I	A	A	I	Q	C	G	A	F	H	N	T	T	G	G	L	T	Y	F	N	T	T	P	L	G	R	A	V	T	G	T	M	L	V	A	A	M	K	E	D	G	V	N	I	W	G	D	G	S	T	Y	K	G	N	D	I	E	R	F	Y	R	Y	G	L	L	T	N	A	E	L	Q	I	Y	K	P	W
Query Conservation		.
Alig confidence		.																																																				.	.	.	.	.
Template Conservation																																																						.	.	.	.	.
Template Sequence		H	A	A	S	H	H	A	L	A	N	T	G	L	I	P	S	D	P	A	K	V	D	F	I	K	G	N	V	K	A	R	A	R	X	V	A	Q	Y	E	I	A	G	Y	V	G	G	L	V	L	G	T	D	.	.	.	.	.	H	S	A	E	N	I	T	G	F	Y	T	K	F	G	D	G	A	C	D	L	A	P	L
Template Known Secondary structure													T		S		S	S																												T				B				.	.	.	.	.								T		S		T	T	T	T	T			S	B		T	T
Template Predicted Secondary structure																																																						.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.						.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	T	D	F	I	D	E	L	G	G	R	H	E	M	S	E	F	M	I	A	C	G	F	D
Query Conservation
Alig confidence				.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.
Template Sequence		F	G	.	.	.	.	.	.	.	L	N	K	R	Q	V	R	L	L	A	K	T	L	G	A	P
Template Known Secondary structure		T	T	.	.	.	.	.	.	.													T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.
Template SS confidence
		191	.								.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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