 |
| Job Description | P0A6E4 | | Confidence | 84.45% | Date | Thu Jan 5 11:02:56 GMT 2012 |
| Rank | 68 | Aligned Residues | 59 |
| % Identity | 10% | Template | c3nbmA_ |
| PDB info |
PDB header:transferase | Chain: A: PDB Molecule:pts system, lactose-specific iibc components; |
PDBTitle: the lactose-specific iib component domain structure of the2 phosphoenolpyruvate:carbohydrate phosphotransferase system (pts) from3 streptococcus pneumoniae.
|
| Resolution | 1.30 Å |
|
| | |
13 | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | |
|
|
|
. | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . |
| Predicted Secondary structure | |
 | | | | |  |
|
|
|  | | | | | | | | | | | |
| . | . | . | . |
|
|
| | | | | | | |
|
|
|
|
| | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | | | | | | | | | | | | |
|
|
|
| | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
R | I | G | I | A | F | S | G | G | L | D | T | S | A | A | L | L | W | M | R | Q | K | . |
. |
. |
. |
G | A | V | P | Y | A | Y | T | A | N | L | G | Q | P | D | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | D | Y | D | A | I | P | R | R | A | M | E | Y | G | A | E | N | A | R | L | I | D |
| Query Conservation | |
|
|
|
|
| |
|
|
|
|
|
|
|
|
|
| | |
|
|
| | . | . | . | . |
| |
|
| |
|
| |
|
| |
|
| | |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
| |
| |
| | | |
| | |
|
|
| | | | |
|
|
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| Template Conservation | |
|
|
|
| |
| | |
| |
|
|
| |
| | |
|
| | | |
| | | | | | | | |
| |
| | | | | | | | | | | | | |
|
|
|
|
|
|
|
|
| | | | | | |
| | | | | | | |
|
| . | |
| | |
| |
| Template Sequence | |
K | V | L | V | L | C | A | G | S | G | T | S | A | Q | L | A | N | A | I | N | E | G | A | N | L | T | E | V | R | V | I | A | N | S | G | A | Y | G | A | H | Y | D | I | X | G | V | Y | D | L | I | I | L | A | P | Q | V | R | S | Y | Y | R | E | X | K | V | D | A | E | R | L | G | I | . |
Q | I | V | A | T | R |
| Template Known Secondary structure | |
| | | | | | S | S | S | S | | | | | | | | | | | | | | | | | T |
| S | | | | | | | | T | T | S |
| T | T | T | G | G | G |
| S | | | | |
| G | G | G | G | G | G | | | | | | | | | T | T | T | T |
| . | | | | |
|
|
| Template Predicted Secondary structure | |
| | | | | |
|
|
|
|
| | | | | | | | | | | | | | |
|
|
|
| | | | | | | | | | | | | | |
|
|
|
|
| | | | |
| | | | | | | | | | | | | | | | | |
|
| . | | | | | |
|
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
457 | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | |
. | 530 | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
