Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6E4
Confidence76.22%DateThu Jan 5 11:02:56 GMT 2012
Rank87Aligned Residues159
% Identity13%Templatec3jw7E_
PDB info PDB header:isomeraseChain: E: PDB Molecule:dipeptide epimerase; PDBTitle: crystal structure of dipeptide epimerase from enterococcus faecalis2 v583 complexed with mg and dipeptide l-ile-l-tyr
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.... .....30.........40.........50.........60.........70.........80.. ..
Predicted Secondary structure 





....














.
Query SS confidence 














. . . .

























































.

Query Sequence  VGQRIGIAFSGGLDT. . . . SAALLWMRQKGAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLIDCRKQLVAEGI. AA
Query Conservation   
 




 





....



  


 
 

 

 

 

  


 
 
   
  


    


 



 
  
. 
Alig confidence 














....












..










































.

Template Conservation                               
  ..  


 
     
   
  

   
    
 



       
   
Template Sequence  YDNQVITDITLGIDEPNVMAQKAVEKVKLGFD. . TLKIKVGTGIEADIARVKAIREAVGFDIKLRLDANQAWTPKDAVKA
Template Known Secondary structure  S
S


S

TTT

..

S

TTS
TT
S
Template Predicted Secondary structure 













..














Template SS confidence 















































































   125....130.........140.........150...... ...160.........170.........180.........190.........200..
 
   85....90.........100.........110.........120.........130.........140.........150.........160....
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  IQCGAFHNTTGGLTYFNTTPLGRAVTGTMLVAAMKEDGVNIWGDGSTYKGNDIERFYRYGLLTNAELQIYKPWLDTDFID
Query Conservation 
 
 
 
       


 
 


      
 
 
   

  














 
    
 
 
  


 

     
Alig confidence 






......

































...





























Template Conservation     
   ...... 
  



    
      
      


 


 ...               
 
  
    


  
Template Sequence  IQALADY. . . . . . QIELVEQPVKRRDLEGLKYVTSQVNTTIMADESC. . . FDAQDALELVKKGTVDVINIKLMKCGGIHE
Template Known Secondary structure  TGGG......


S
TT

SSSTT
...
ST

S
TS
Template Predicted Secondary structure 
......

















...













Template SS confidence 















































































   203...... 210.........220.........230.........240... ......250.........260.........270...
 
   165....170.........180...
Predicted Secondary structure 







Query SS confidence 


















Query Sequence  ELGGRHEMSEFMIACGFDY
Query Conservation   
 

 
 



   


 
Alig confidence 

....












Template Conservation    ....     
   

  
Template Sequence  AL. . . . KINQICETAGIEC
Template Known Secondary structure  ....T
Template Predicted Secondary structure  ....



Template SS confidence 


















   274. ....280........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions