 |
Job Description | P0A6E4 | Confidence | 34.76% | Date | Thu Jan 5 11:02:56 GMT 2012 |
Rank | 202 | Aligned Residues | 64 |
% Identity | 27% | Template | c3hlyA_ |
PDB info |
PDB header:flavoprotein | Chain: A: PDB Molecule:flavodoxin-like domain; |
PDBTitle: crystal structure of the flavodoxin-like domain from2 synechococcus sp q5mzp6_synp6 protein. northeast structural3 genomics consortium target snr135d.
|
Resolution | 2.40 Å |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | |
|
|
|
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | |
|
|
. | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
. | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
| . | . | . | . |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
| . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | T | T | I | L | K | H | L | P | . |
. |
. |
. |
V | G | Q | R | I | G | I | A | F | S | G | G | L | D | T | . |
. |
. |
S | A | A | L | L | W | M | R | Q | K | G | A | V | P | Y | A | Y | T | A | N | L | . |
G | Q | P | D | E | E | D | Y | D | A | I | P | R | R | A | M | E | Y | G |
Query Conservation |   |
  |   |   |   |
|   |   |
|   | . | . | . | . |   |
|   |
|
|
|
|
|   |
|
|
|
|
|
| . | . | . |
|
|
|
|   |   |
|
|
|   |
|   |
|
|   |
|
|   |
|
|   | . |
|
|   |   |
|
|
|   |
|   |
|   |   |   |
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |
|
|
|   |
|   |   |
|   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |
|   |
|   |   |
|   |
Template Sequence |   |
V | A | T | A | L | S | T | I | F | A | A | A | H | N | K | Q | A | I | G | L | F | D | S | Y | G | G | D | D | E | P | I | D | A | L | L | A | Q | F | R | N | L | G | L | H | T | A | F | P | P | I | R | V | K | D | Q | P | T | E | A | I | Y | Q | Q | C | E | E | S | G | T | D | L | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
| T | T | S |  |  |  |  |  |
|
|
|
| S | S | B |
|
|  |  |  |  |  |  |  |  |  |  | T | T |
|  |  | S | S | S |
| B |
|
|
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
328 | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|