Job Description P0A6E4 Confidence 99.79% Date Thu Jan 5 11:02:56 GMT 2012 Rank 22 Aligned Residues 151 % Identity 17% Template c2c5sA_ PDB info PDB header:rna-binding protein Chain: A: PDB Molecule:probable thiamine biosynthesis protein thii; PDBTitle: crystal structure of bacillus anthracis thii, a trna-2 modifying enzyme containing the predicted rna-binding3 thump domain Resolution 2.5 Å

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		8	.	10	.	.			.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.						.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.																																					.																.	.	.	.	.
Query SS confidence							.	.																																					.																.	.	.	.	.
Query Sequence		L	P	V	G	Q	.	.	R	I	G	I	A	F	S	G	G	L	D	T	S	A	A	L	L	W	M	R	Q	K	G	A	V	P	Y	A	Y	T	A	N	L	G	Q	P	.	D	E	E	D	Y	D	A	I	P	R	R	A	M	E	Y	.	.	.	.	.	G	A	E	N	A	R	L	I	D	C	R	K	Q	L	V	A
Query Conservation							.	.																																					.																.	.	.	.	.
Alig confidence							.	.																																					.																.	.	.	.	.			.
Template Conservation																																																																				.
Template Sequence		L	P	V	G	V	G	G	K	V	M	V	L	L	S	G	G	I	D	S	P	V	A	A	Y	L	T	M	K	R	G	V	S	V	E	A	V	H	F	H	S	P	P	F	T	S	E	R	A	K	Q	K	V	I	D	L	A	Q	E	L	T	K	Y	C	K	R	V	.	T	L	H	L	V	P	F	T	E	V	Q	K	T
Template Known Secondary structure		B		T	T	T	T									S	S	S												B	T											T	T	T	S																G	G	G	S	S			.
Template Predicted Secondary structure																																																																				.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.	.	.	.	.	.	250
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.				140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.
Query SS confidence																																																														.	.	.
Query Sequence		E	G	I	A	A	I	Q	C	G	A	F	H	N	T	T	G	G	L	T	Y	F	N	T	T	P	L	G	R	A	V	T	G	T	M	L	V	A	A	M	K	E	D	G	V	N	I	W	G	D	G	S	T	Y	K	G	N	D	I	E	R	.	.	.	F	Y	R	Y	G	L	L	T	N	A	E	L	Q	I	Y	K	P
Query Conservation																																																														.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.						.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.
Template Sequence		I	N	K	E	I	.	.	.	.	.	.	.	.	.	.	.	.	.	P	S	S	Y	S	M	T	V	M	R	R	M	M	M	R	I	T	E	R	I	A	E	E	R	N	A	L	A	I	T	T	G	E	S	L	.	.	G	Q	V	A	S	Q	T	L	D	S	M	H	T	I	N	E	V	T	N	Y	P	V	I	R	P
Template Known Secondary structure						S	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G																				T	T										S	.	.	S	S	T	T	S										G	G	G			S					T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.
Template SS confidence
		251	.	.	.	.														.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290			.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	L	D	T	D	F	I	D	E	L	G	G	R	H	E	M	S	E	F	M	I	A	C	G	F
Query Conservation
Alig confidence							.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.
Template Sequence		L	I	T	M	D	.	.	.	.	.	.	.	K	L	E	I	I	K	I	A	E	E	I	G	T
Template Known Secondary structure		T	T	T			.	.	.	.	.	.	.											T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.
Template SS confidence
		316	.	.	.	320								.	.	.	.	.	.	.	.	.	330	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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