Job Description P0A6E4 Confidence 98.83% Date Thu Jan 5 11:02:56 GMT 2012 Rank 47 Aligned Residues 129 % Identity 12% Template c1vbkA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein ph1313; PDBTitle: crystal structure of ph1313 from pyrococcus horikoshii ot3 Resolution 1.90 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	R	I	G	I	A	F	S	G	G	L	D	T	S	A	A	L	L	W	M	R	Q	K	G	A	V	P	Y	A	Y	T	A	N	L	G	Q	P	D	E	E	D	Y	D	A	I	P	R	R	A	M	E	Y	G	A	E	N	A	R	L	I	D	C	R	K	Q	L	V	A	E	G	I	A	A	I	Q	C	G	A	F
Query Conservation
Alig confidence														.																									.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.																									.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	G	R	M	I	G	I	L	H	D	E	L	.	S	A	L	A	I	F	L	M	M	K	R	G	V	E	V	I	P	V	Y	I	G	K	D	D	.	.	.	K	N	L	E	K	V	R	S	L	W	N	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T								S	S			.											B	T									S		S	S	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure														.																									.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.				.	.	.	.	.	220	.	.	.	.	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		H	N	T	T	G	G	L	T	Y	F	N	T	T	P	L	G	R	A	V	T	G	T	M	L	V	A	A	M	K	E	D	G	V	N	I	W	G	D	G	S	T	Y	K	G	N	D	I	E	R	F	Y	R	Y	G	L	L	T	N	A	E	L	Q	I	Y	K	P	W	L	D	T	D	F	I	D	E	L	G	G	R	H
Query Conservation
Alig confidence		.	.													.	.																																																								.	.	.	.	.	.	.
Template Conservation		.	.													.	.																																																								.	.	.	.	.	.	.
Template Sequence		.	.	K	R	Y	S	Y	G	S	K	G	F	L	V	.	.	V	A	E	S	F	D	R	V	L	K	L	I	R	D	F	G	V	K	G	V	I	K	G	L	R	P	N	D	L	N	S	E	V	S	E	I	T	E	D	F	K	M	F	P	V	P	V	Y	Y	P	L	I	A	L	P	.	.	.	.	.	.	.	E	E
Template Known Secondary structure		.	.		T	T		T	T	S						.	.			S	S												T										G	G	G			T	T												S	S									S		.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.													.	.																																																								.	.	.	.	.	.	.
Template SS confidence
				228	.	230	.	.	.	.	.	.	.	.	.			240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.								.	.
		171	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M	S	E	F	M	I	A	C	G	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	I	K	S	V	K	E	R	L	G	L
Template Known Secondary structure											T
Template Predicted Secondary structure
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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