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2 | . | . | . | . | . | . | . | |
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10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | |
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. | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
A | R | V | T | L | R | I | T | . |
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G | T | Q | L | L | C | Q | D | E | H | P | S | L | L | A | A | L | E | S | H | N | V | A | V | E | Y | Q | C | R | E | G | Y | C | G | S | C | R | T | R | L | V | A | G | Q | V | . |
. |
. |
D | W | I | A | E | P | L | A | F | I | Q | P | G | E | I | L | P | C | C | C |
Query Conservation |   |
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|   |   |   |   |   | . | . | . | . |
|   |   |   |   |   |   |   |   |   |   |
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Alig confidence |   |
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Template Conservation |   |
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|   |   |   |   |   |   |   |   |   |
|   | . |
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Template Sequence |   |
F | K | V | T | L | I | N | E | A | E | G | T | K | H | E | I | E | V | P | D | D | E | . |
Y | I | L | D | A | A | E | E | Q | G | Y | D | L | P | F | S | C | R | A | G | A | C | S | T | C | A | G | K | L | V | S | G | T | V | D | Q | S | D | Q | S | F | L | D | D | D | Q | I | E | A | G | Y | V | L | T | C | V | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  |  |  | T | T | S | . |
|  |  |  |  |  |  |  | T | T |
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| S | S | S | S | S | S | S | S | T | T |  |  |  |  |  |  | S |
|  |  |
| T | T |
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| S | S |
|  |  |  |  |  | T | T |  |  |  | G | G | G |
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Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | |
. | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
  |
  |   |
75 | . | . | . | . | 80 | . | . | . | . |
Predicted Secondary structure |   |
 |  |
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|  |  |  |  |
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Query SS confidence |   |
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Query Sequence |   |
R | A | K | G | D | I | E | I | E | M |
Query Conservation |   |
  |   |   |
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|   |
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Alig confidence |   |
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|
Template Conservation |   |
  |   |   |   |
|   |   |
|   |
|
Template Sequence |   |
Y | P | T | S | D | V | V | I | Q | T |
Template Known Secondary structure |   |
 |  | S | S |
|  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |
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|  |  |  |  |  |
Template SS confidence |   |
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  |   |
82 | . | . | . | . | . | . | . | 90 | . |
  |