Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABW3
Confidence5.39%DateThu Jan 5 11:16:31 GMT 2012
Rank87Aligned Residues8
% Identity38%Templatec2i5yS_
PDB info PDB header:virus/viral protein/immune systemChain: S: PDB Molecule:cd4m47, scorpion-toxin mimic of cd4; PDBTitle: crystal structure of cd4m47, a scorpion-toxin mimic of cd4, in complex2 with hiv-1 yu2 gp120 envelope glycoprotein and anti-hiv-1 antibody3 17b
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   40.......
Predicted Secondary structure 



Query SS confidence 







Query Sequence  GYCGSCRT
Query Conservation 
 

 
  
Alig confidence 







Template Conservation 







Template Sequence  GRCATCAC
Template Known Secondary structure 
B



B
Template Predicted Secondary structure 

Template SS confidence 







   17..20....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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