Return to main results Retrieve Phyre Job Id

Job DescriptionP75946
Confidence51.28%DateThu Jan 5 12:16:17 GMT 2012
Rank19Aligned Residues75
% Identity12%Templatec2kl6A_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of the cardb domain of pf1109 from2 pyrococcus furiosus. northeast structural genomics3 consortium target pfr193a
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   44.....50.........60.........70.........80.........90.........100.........110.........120...
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  ISAEKPFLSTSDIQPSASSTLYNERQEPVTVHYRFYWYDARGLEMHPLERPRSVTIPAHSAVTLYGSANFLGAHKVRLYL
Query Conservation 
          

 
   
 
 
       
 


 


  
  
     
  
 
       
   

 
 
   



Alig confidence 






























.







.





....




























Template Conservation 

   
     
    
  

 
 
   
  .  
 
   .      ....    
  
 
 

         
   
 
Template Sequence  VEIKGPDVVGVNKLAEYEVHVKNLGGIGVPS. TKVRVYIN. GTLYKN. . . . WTVSLGPKEEKVLTFSWTPTQEGMYRINA
Template Known Secondary structure  S
STT


SSS
.T.T....
TT



S
Template Predicted Secondary structure 
















.

.
....











Template SS confidence 















































































   442.......450.........460.........470.. .......480 ...... ...490.........500.........510.....
 
   124
Predicted Secondary structure 
Query SS confidence 
Query Sequence  Y
Query Conservation   
Alig confidence 
Template Conservation   
Template Sequence  T
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   516
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions