Job Description P75946 Confidence 8.92% Date Thu Jan 5 12:16:17 GMT 2012 Rank 92 Aligned Residues 46 % Identity 9% Template c2h7fX_ PDB info PDB header:isomerase/dna Chain: X: PDB Molecule:dna topoisomerase 1; PDBTitle: structure of variola topoisomerase covalently bound to dna Resolution 2.70 Å

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		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.														.	.	.	.	.	.	.	100					.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.
Query Sequence		R	F	Y	W	Y	D	A	R	G	L	E	M	H	P	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	R	P	R	S	V	T	I	P	.	.	.	.	A	H	S	A	V	T	L	Y	G	S	A	N	F	L	G	A	H	K	V	R	L	Y
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.
Template Conservation
Template Sequence		K	L	F	T	D	N	N	F	L	N	P	V	S	D	N	N	P	A	Y	E	V	L	Q	H	V	K	I	P	T	H	L	T	D	V	V	V	Y	G	Q	T	W	E	E	A	L	T	R	L	I	F	V	G	S	D	S	K	G	R	R	Q	Y	F	Y
Template Known Secondary structure					S	S	T	T	S		S	B			T	T		T												T	T															T	T	S								T	T	S
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions