Job Description P75946 Confidence 42.32% Date Thu Jan 5 12:16:17 GMT 2012 Rank 26 Aligned Residues 95 % Identity 19% Template c1pfoA_ PDB info PDB header:toxin Chain: A: PDB Molecule:perfringolysin o; PDBTitle: perfringolysin o Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80					.	.	.	.	.	.	.	.					.	90	.	.	.
Predicted Secondary structure																																																													.	.	.	.									.	.	.	.
Query SS confidence																																																													.	.	.	.									.	.	.	.
Query Sequence		H	P	E	I	P	V	N	D	E	Q	S	L	V	M	E	S	S	L	L	A	A	G	I	S	A	E	K	P	F	L	S	T	S	D	I	Q	P	S	A	S	S	T	L	Y	N	E	R	Q	E	P	V	T	V	H	Y	R	F	Y	W	.	.	.	.	Y	D	A	R	G	L	E	M	.	.	.	.	H	P	L	E	R
Query Conservation																																																													.	.	.	.									.	.	.	.
Alig confidence																													.																							.	.								.	.	.	.									.	.	.	.
Template Conservation																													.																							.	.
Template Sequence		N	P	A	Y	P	I	S	Y	T	S	V	F	L	K	D	N	S	V	A	A	V	H	N	K	T	D	Y	.	I	E	T	T	S	T	E	Y	S	K	G	K	I	N	L	D	H	S	G	A	Y	V	.	.	A	Q	F	E	V	A	W	D	E	V	S	Y	D	K	E	G	N	E	V	L	T	H	K	T	W	D	G	N
Template Known Secondary structure		S												T	T	T			B										.																				S	S		.	.														T	T	S										T	T	T
Template Predicted Secondary structure																													.																							.	.
Template SS confidence
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.		.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.			.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	S	V	T	I	P	A	H	S	A	V	T	L	Y	G	S	A	N	F	L	G	A	H	K	V	R	L	Y	L	Y
Query Conservation
Alig confidence																		.	.	.	.	.
Template Conservation																		.	.	.	.	.
Template Sequence		Y	Q	D	K	T	A	H	Y	S	T	V	I	P	L	E	A	.	.	.	.	.	N	A	R	N	I	R	I	K	A	R
Template Known Secondary structure		T			B		S	S									T	.	.	.	.	.	T
Template Predicted Secondary structure																		.	.	.	.	.
Template SS confidence
		432	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.						.	.	450	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions