Return to main results Retrieve Phyre Job Id

Job DescriptionP31063
Confidence4.69%DateThu Jan 5 11:47:00 GMT 2012
Rank32Aligned Residues55
% Identity24%Templatec2zjtB_
PDB info PDB header:isomeraseChain: B: PDB Molecule:dna gyrase subunit b; PDBTitle: crystal structure of dna gyrase b' domain sheds lights on2 the mechanism for t-segment navigation
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4950.........60.........70.........80.........90.........100. ........110...
Predicted Secondary structure 



















......




Query SS confidence 




















































. . . . . .











Query Sequence  SPEAIGSLIVTKEGDTLDCRQWQRVIAVPGKLTLMSDDLTNVTVKRELYEVER. . . . . . DGNTIEYDGMTM
Query Conservation 



 





 














 




  

 
 


 
 

  


......

  







Alig confidence 










.



.....









....

















......











Template Conservation   
    




.



..... 








.... 

  
 

  

  

 
     
   


 



Template Sequence  TDPRKSELYVV. EGDM. . . . . FQAILPLRGK. . . . DRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVL
Template Known Secondary structure 

GGG.



.....



....

GGGS
S

GGG

GGG


S
Template Predicted Secondary structure 


.


.....



....













Template SS confidence 






































































   487..490....... ..500. ........510. ........520.........530.........540.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions