Job Description P0AAB2 Confidence 96.55% Date Thu Jan 5 11:12:25 GMT 2012 Rank 21 Aligned Residues 85 % Identity 32% Template c3o2sB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:rna polymerase ii subunit a c-terminal domain phosphatase PDBTitle: crystal structure of the human symplekin-ssu72 complex Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40				.	.	.	.	.	.																													.	.	.	50	.	.
Predicted Secondary structure																																							.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	I	L	V	V	C	V	G	N	I	C	R	S	P	T	A	E	R	L	L	Q	R	Y	H	P	E	L	K	V	E	S	A	G	L	G	A	L	.	.	.	V	G	K	G	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	T	A	I	S	V
Query Conservation																																							.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.														.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.
Template Sequence		R	V	A	V	V	C	S	S	N	Q	N	R	S	M	E	A	H	N	I	L	S	K	.	.	R	G	F	S	V	R	S	F	G	T	G	T	H	V	K	L	P	G	P	A	P	D	K	P	N	V	Y	D	F	K	T	T	Y	D	Q	M	Y	N	D	L	L	R	K	D	K	E	L	Y	T	Q	N	G	I	L	H	M
Template Known Secondary structure								S	S	S	S	S												.	.	T	T									S	S	S								T	T							T	T	S											T	T								T	S
Template Predicted Secondary structure																								.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.			.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		53	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		A	A	E	.	H	Q	L	S	L	E	G	H	C	A	R	Q	I	S	R	R	L	C	R	N	Y	D	L	I	L	T	M	E	K	R	H	I	E	R	L	C	E	M	A
Query Conservation					.
Alig confidence					.																.	.	.	.
Template Conservation																					.	.	.	.
Template Sequence		L	D	R	N	K	R	I	K	P	R	P	E	R	F	Q	N	C	K	D	.	.	.	.	L	F	D	L	I	L	T	C	E	E	R	V	Y	D	Q	V	V	E	D	L
Template Known Secondary structure										S	S			B	G	G	G				.	.	.	.			S					S	S
Template Predicted Secondary structure																					.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.					.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions