Job Description P0AAB2 Confidence 60.27% Date Thu Jan 5 11:12:25 GMT 2012 Rank 42 Aligned Residues 79 % Identity 9% Template c2ph5A_ PDB info PDB header:transferase Chain: A: PDB Molecule:homospermidine synthase; PDBTitle: crystal structure of the homospermidine synthase hss from legionella2 pneumophila in complex with nad, northeast structural genomics target3 lgr54 Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	F	N	N	I	L	V	V	C	V	G	N	I	C	R	S	P	T	A	E	R	L	L	Q	R	Y	H	P	E	L	K	V	E	S	A	G	L	G	A	L	V	G	K	G	A	D	P	T	A	I	S	V	A	A	E	H	Q	L	S	L	E	G	H	C	A	R	Q	I	S	R	R	L	C	R	N	Y	D	L	I	L
Query Conservation
Alig confidence																		.									.	.
Template Conservation																		.									.	.
Template Sequence		F	K	N	R	F	V	I	L	G	F	G	C	V	G	Q	A	.	L	X	P	L	I	F	E	K	.	.	F	D	I	K	P	S	Q	V	T	I	I	A	A	E	G	T	K	V	D	V	A	Q	Q	Y	G	V	S	F	K	L	Q	Q	I	T	P	Q	N	Y	L	E	V	I	G	S	T	L	E	E	N	D	F	L	I
Template Known Secondary structure				S								S						.									.	.	B				G	G	G						S	S			S								T										T	T	T					T	G	G	G			T	T
Template Predicted Secondary structure																		.									.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		81	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		89	90

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions