Job Description P37017 Confidence 99.89% Date Thu Jan 5 11:54:28 GMT 2012 Rank 1 Aligned Residues 155 % Identity 23% Template c2jtyA_ PDB info PDB header:structural protein Chain: A: PDB Molecule:type-1 fimbrial protein, a chain; PDBTitle: self-complemented variant of fima, the main subunit of type 1 pilus Resolution UNK

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.				.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																																																.	.	.
Query SS confidence																																																.	.	.
Query Sequence		S	Y	A	A	T	D	S	I	G	L	T	V	I	T	T	V	E	M	G	T	C	T	A	T	L	V	N	D	S	D	Q	D	I	S	V	V	D	F	G	D	V	Y	I	S	E	I	.	.	.	N	A	K	T	K	V	K	T	F	K	L	K	F	K	D	C	A	G	I	P	N	K	K	A	Q	I	K	L	T	K	R
Query Conservation																																																.	.	.
Alig confidence																															.	.	.	.														.	.	.
Template Conservation																															.	.	.	.
Template Sequence		A	A	T	T	V	N	G	G	T	V	H	F	K	G	E	V	V	N	A	A	C	A	V	D	A	G	S	V	D	.	.	.	.	Q	T	V	Q	L	G	Q	V	R	T	A	S	L	A	Q	E	G	A	T	S	S	A	V	G	F	N	I	Q	L	N	D	C	D	T	N	V	A	S	K	A	A	V	A	F	L	G	T
Template Known Secondary structure							S	S	S	S					S	S					S	S									.	.	.	.										G	G	G		S	S						S													T	T	T		S
Template Predicted Secondary structure																															.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.					30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	C	E	G	T	A	N	D	G	A	G	F	A	N	G	S	T	A	A	D	K	A	S	A	V	A	V	E	V	W	S	T	V	T	P	A	T	G	S	A	T	Q	F	S	C	V	T	P	A	S	Q	E	V	T	I	S	T	A	A	N	A	V	V	Y	Y	P	M	S	A	R	L	V	V	E	K	N	K	T	V
Query Conservation
Alig confidence					.	.	.																																				.	.	.	.	.	.	.	.																													.	.	.
Template Conservation					.	.	.																																				.	.	.	.	.	.	.	.																													.	.	.
Template Sequence		A	I	D	.	.	.	A	G	H	T	N	V	L	A	L	Q	S	S	A	A	G	S	A	T	N	V	G	V	Q	I	L	D	R	T	G	A	A	L	T	L	D	.	.	.	.	.	.	.	.	G	A	T	F	S	S	E	T	T	L	N	N	G	T	N	T	I	P	F	Q	A	R	Y	F	A	T	G	A	.	.	.
Template Known Secondary structure		B	S	S	.	.	.	G	G	G	T	T	S	B				S		T	T	T	S		S	S								T	T	S		B			B	T	.	.	.	.	.	.	.	.	S											S															S	S	.	.	.
Template Predicted Secondary structure					.	.	.																																				.	.	.	.	.	.	.	.																													.	.	.
Template SS confidence
		77	.	.				80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.									.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		N	N	V	T	A	G	K	F	S	A	P	A	T	F	T	V	T	Y
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	A	T	P	G	A	A	N	A	D	A	T	F	K	V	Q	Y
Template Known Secondary structure		.	.				S
Template Predicted Secondary structure		.	.
Template SS confidence
				143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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