Job Description P37017 Confidence 99.85% Date Thu Jan 5 11:54:28 GMT 2012 Rank 6 Aligned Residues 150 % Identity 21% Template c2jmrA_ PDB info PDB header:cell adhesion Chain: A: PDB Molecule:fimf; PDBTitle: nmr structure of the e. coli type 1 pilus subunit fimf Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.				.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.
Query SS confidence																																											.	.	.
Query Sequence		D	S	I	G	L	T	V	I	T	T	V	E	M	G	T	C	T	A	T	L	V	N	D	S	D	Q	D	I	S	V	V	D	F	G	D	V	Y	I	S	E	I	.	.	.	N	A	K	T	K	V	K	T	F	K	L	K	F	K	D	C	A	G	I	P	N	K	K	A	Q	I	K	L	T	K	R	A	T	C	E	G
Query Conservation																																											.	.	.
Alig confidence																										.	.	.	.														.	.	.																					.
Template Conservation																										.	.	.	.																																					.
Template Sequence		A	D	S	T	I	T	I	R	G	Y	V	R	D	N	G	C	S	V	A	A	E	S	T	N	.	.	.	.	F	T	V	D	L	M	E	N	A	A	K	Q	F	N	N	I	G	A	T	T	P	V	V	P	F	R	I	L	L	S	P	C	G	N	A	V	.	S	A	V	K	V	G	F	T	G	V	A	D	S	H	N
Template Known Secondary structure							S	S	S					S	S	S										.	.	.	.							B			G	G	G			S	T	T		B										B		S			S			.											B		S	S
Template Predicted Secondary structure																										.	.	.	.																																					.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.					.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	N	D	G	A	G	F	A	N	G	S	T	A	A	D	K	A	S	A	V	A	V	E	V	W	S	T	V	T	P	A	T	G	S	A	T	Q	F	S	C	V	T	P	A	S	Q	E	V	T	I	S	T	A	A	N	A	V	V	Y	Y	P	M	S	A	R	L	V	V	E	K	N	K	T	V	N	N	V	T	A
Query Conservation
Alig confidence				.	.	.	.	.																															.	.	.	.	.	.																										.	.	.	.
Template Conservation				.	.	.	.	.																															.	.	.	.	.	.																										.	.	.	.
Template Sequence		A	N	.	.	.	.	.	L	L	A	L	E	N	T	V	S	A	A	S	G	L	G	I	Q	L	L	N	E	Q	Q	N	Q	I	P	L	N	A	.	.	.	.	.	.	P	S	S	A	L	S	W	T	T	L	T	P	G	K	P	N	T	L	N	F	Y	A	R	L	M	.	.	.	.	A	T	Q	V	P	V	T	A
Template Known Secondary structure		T	T	.	.	.	.	.	S	B					S	T	T	B		S	S								T	T			B			S	S	S	.	.	.	.	.	.		G	G	G	S							S	S	S		B										.	.	.	.		S	S
Template Predicted Secondary structure				.	.	.	.	.																															.	.	.	.	.	.																										.	.	.	.
Template SS confidence
		77	.						.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.							.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.					.	.	.	.	.	.	140	.
		188	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	F	S	A	P	A	T	F	T	V	T	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	H	I	N	A	T	A	T	F	T	L	E	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions