|   |
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query SS confidence |   |
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Query Sequence |   |
T | V | E | M | G | T | C | T | A | T | L | V | N | D | S | D | Q | D | I | S | V | V | D | F | G | D | V | Y | I | S | E | I | N | A | K | T | K | V | K | T | F | K | L | K | F | K | D | C | A | G | I | P | N | K | K | A | Q | I | K | L | T | K | R | A | T | C | E | G | T | A | N | D | G | A | G | F | A | N | G | S |
Query Conservation |   |
  |
|   |   |   |
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|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
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| . | . | . | . | . | . |
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| . | . | . | . | . | . | . | . |
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Template Conservation |   |
  |   |   |   |   |
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|   |   |   |   |   |   | . | . | . | . | . | . |
|   |
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|   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |
|   |
|   |
| . |   |
|   |   |   |   |   | . | . |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   | . | . | . | . | . |   |
|   |   |   |
Template Sequence |   |
V | V | P | T | G | G | C | D | V | S | A | R | D | V | T | . |
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. |
V | T | L | P | D | Y | P | . |
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G | S | V | P | I | P | L | T | V | . |
Y | C | A | K | S | Q | N | . |
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L | G | Y | Y | L | S | G | T | T | A | D | A | G | N | S | . |
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I | F | T | N | T |
Template Known Secondary structure |   |
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|  |  |  |
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| S |
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| . | . | . | . | . | . |
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| S | S | S | . | . | . | . | . | . | . | . |
| B |
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|  |  | . |  |
| S | S |
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| . | . |  |  |  |  |  |  |
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| B | S | S | S | S | S |
| . | . | . | . | . | S | B |
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Template Predicted Secondary structure |   |
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|  | . | . | . | . | . | . |  |  |
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Template SS confidence |   |
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  |   |
155 | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | |
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170 | . | . | . | . | . | . | |
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. | . | . | 180 | . | . | . | . | . | |
. | . | . | . | 190 | . | . | |
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. | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | |
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. | . | 210 | . | . |
  |
  |   |
120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
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Query Sequence |   |
T | A | A | D | K | A | S | A | V | A | V | E | V | W | S | T | V | T | P | A | T | G | S | A | T | Q | F | S | C | V | T | P | A | S | Q | E | V | T | I | S | T | A | A | N | A | V | V | Y | Y | P | M | S | A | R | L | V | V | E | K | N | K | T | V | N | N | V | T | A | G | K | F | S | A | P | A | T | F | T | V | T |
Query Conservation |   |
  |   |   |   |   |
|   |
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|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
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|   |
|   |   |   |
|   |
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|   |
|   |
Alig confidence |   |
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| . | . | . | . | . | . | . | . | . | . | . |
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| . | . | . | . |
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Template Conservation |   |
  |   |   |   |   |
|   |
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|   |   |   |   |   |   |
| . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|   | . | . | . | . |   |
|   |   |   |
|
|   |
|   |   |   |
|   |   |
|   |
|
|   |
Template Sequence |   |
A | S | F | S | P | A | Q | G | V | G | V | Q | L | T | R | N | G | T | I | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | A | N | N | T | V | S | L | G | A | V | G | T | S | A | V | S | L | G | L | T | A | N | Y | A | . |
. |
. |
. |
R | T | G | G | Q | V | T | A | G | N | V | Q | S | I | I | G | V | T | F | V |
Template Known Secondary structure |   |
|
| S | S |
|
| S | S |
|  |  |  |
|  |  | T | T |  |  |
| . | . | . | . | . | . | . | . | . | . | . |
| T | T |
|
|  |  |  |  |
|
| S | S | S |
|  |  |
|
| B |
|
|  |  |  | . | . | . | . |
|
| S | S |
|
|
| S | S |
|
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|
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|
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|  |  |  |  |  |  |  |  |  |
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|
|  |  | . | . | . | . | . | . | . | . | . | . | . |
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|  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
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  |   |
213 | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | |
|
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|
. | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | |
|
|
|
. | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . |
  |
  |   |
200 |
Predicted Secondary structure |   |
 |
Query SS confidence |   |
|
Query Sequence |   |
Y |
Query Conservation |   |
|
Alig confidence |   |
|
Template Conservation |   |
|
Template Sequence |   |
Y |
Template Known Secondary structure |   |
 |
Template Predicted Secondary structure |   |
 |
Template SS confidence |   |
|
  |   |
278 |
  |