Job Description P75864 Confidence 98.87% Date Thu Jan 5 12:15:14 GMT 2012 Rank 164 Aligned Residues 132 % Identity 15% Template c3tqsB_ PDB info PDB header:transferase Chain: B: PDB Molecule:ribosomal rna small subunit methyltransferase a; PDBTitle: structure of the dimethyladenosine transferase (ksga) from coxiella2 burnetii Resolution 1.98 Å

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		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	E	T	L	A	A	A	I	V	M	R	S	G	W	Q	P	G	T	P	L	L	D	P	M	C	G	S	G	T	L	L	I	E	A	A	M	L	A	T	D	R	A	P	G	L	H	R	G	R	W	G	F	S	G	W	A	Q	H	D	E	A	I	W	Q	E	V	K	A	E	A	Q	T	R	A	R	K	G	L	A
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	D	S	F	V	L	Q	K	I	V	S	A	I	H	P	Q	K	T	D	T	L	V	E	I	G	P	G	R	G	A	L	T	D	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L
Template Known Secondary structure																		T	T									T	T	T	T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.																																													50	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.		.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		E	Y	S	S	H	F	Y	G	S	D	S	D	A	R	V	I	Q	R	A	R	T	N	A	R	L	A	G	I	G	E	L	I	T	F	E	V	K	D	V	A	Q	L	T	N	P	.	L	P	K	G	P	Y	G	T	V	L	S	N	P	P	Y	G	E	R	L	D	S	E	P	A	L	I	A	L	H	S	L	L	G	R
Query Conservation																																															.
Alig confidence																													.	.	.																.																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.																																	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	E	C	D	N	L	A	L	V	E	I	D	R	D	L	V	A	F	L	Q	K	K	Y	N	Q	Q	K	.	.	.	N	I	T	I	Y	Q	N	D	A	L	Q	F	D	F	S	S	V	K	T	D	K	P	L	R	V	V	G	N	L	P	Y	N	.	.	.	.	.	.	.	.	.	.	.	I	S	T	P	L	L	F
Template Known Secondary structure		T	T	S	S																				T	T		T	.	.	.	T						S		T	T	T			G	G	G	S			S	S												.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																													.	.	.																																	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.				.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110												.	.	.	.	.	.	.
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	M	K	N	Q	F	G	G	W	N	L	S	L	F	S	A	S	P	D	L	L	S	C	L	Q	L	R	A	D	K	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	L	F	S	Q	I	H	C	I	E	D	X	H	F	X	L	Q	K	E	V	V	R	R	I	T	A	E	V	G	S	H
Template Known Secondary structure						T	G	G	G																	T			T	T	S	T
Template Predicted Secondary structure
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions